BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0950.1
(239 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 136 2e-36
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 136 2e-36
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 94 4e-23
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 136 bits (343), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 97/171 (56%), Gaps = 14/171 (8%)
Query: 49 LHYFLGIEVQKFPSHLHLSQTKYLVELLHKSDLLDCKPSLIPVSCDIRRSTSGYCIFLAS 108
LHY G Q + SQ + +++ + CK D RRST+GYC+FL +
Sbjct: 421 LHYIKGTVGQGL---FYSSQAEMQLQVFSDASFQSCK--------DTRRSTNGYCMFLGT 469
Query: 109 TLVSWSSKKQTTVSRSSPEAEYRALSLATSEMLWITYLLDELHQPIAFPVDLLCDNMGAK 168
+L+SW SKKQ VS+SS EAEYRALS AT EM+W+ EL P++ P L CDN A
Sbjct: 470 SLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAI 529
Query: 169 FLAYNPVFHARTKHIEIDFHFIRNL-VKNGTLTIKFVASDENLADIFTKGL 218
+A N VFH RTKHIE D H +R V TL+ F A DE D FT+ L
Sbjct: 530 HIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYL 578
Score = 71.6 bits (174), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 11 LAFLLYVDDIILTGTSLTLMDQLVVDLTKAFSMKKLGNLHYFLGIEVQKFPSHLHLSQTK 70
L L+YVDDII+ + +D+L L F ++ LG L YFLG+E+ + + +++ Q K
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRK 337
Query: 71 YLVELLHKSDLLDCKPSLIPV 91
Y ++LL ++ LL CKPS +P+
Sbjct: 338 YALDLLDETGLLGCKPSSVPM 358
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 136 bits (343), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 97/171 (56%), Gaps = 14/171 (8%)
Query: 49 LHYFLGIEVQKFPSHLHLSQTKYLVELLHKSDLLDCKPSLIPVSCDIRRSTSGYCIFLAS 108
LHY G Q + SQ + +++ + CK D RRST+GYC+FL +
Sbjct: 421 LHYIKGTVGQGL---FYSSQAEMQLQVFSDASFQSCK--------DTRRSTNGYCMFLGT 469
Query: 109 TLVSWSSKKQTTVSRSSPEAEYRALSLATSEMLWITYLLDELHQPIAFPVDLLCDNMGAK 168
+L+SW SKKQ VS+SS EAEYRALS AT EM+W+ EL P++ P L CDN A
Sbjct: 470 SLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAI 529
Query: 169 FLAYNPVFHARTKHIEIDFHFIRNL-VKNGTLTIKFVASDENLADIFTKGL 218
+A N VFH RTKHIE D H +R V TL+ F A DE D FT+ L
Sbjct: 530 HIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYL 578
Score = 71.6 bits (174), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 11 LAFLLYVDDIILTGTSLTLMDQLVVDLTKAFSMKKLGNLHYFLGIEVQKFPSHLHLSQTK 70
L L+YVDDII+ + +D+L L F ++ LG L YFLG+E+ + + +++ Q K
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRK 337
Query: 71 YLVELLHKSDLLDCKPSLIPV 91
Y ++LL ++ LL CKPS +P+
Sbjct: 338 YALDLLDETGLLGCKPSSVPM 358
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 94.4 bits (233), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 13 FLLYVDDIILTGTSLTLMDQLVVDLTKAFSMKKLGNLHYFLGIEVQKFPSHLHLSQTKYL 72
LLYVDDI+LTG+S TL++ L+ L+ FSMK LG +HYFLGI+++ PS L LSQTKY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 73 VELLHKSDLLDCKPSLIPVSCDIRRSTS 100
++L+ + +LDCKP P+ + S S
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVS 90
Score = 68.6 bits (166), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 96 RRSTSGYCIFLASTLVSWSSKKQTTVSRSSPEAEYRALSLATSEMLW 142
RRST+G+C FL ++SWS+K+Q TVSRSS E EYRAL+L +E+ W
Sbjct: 179 RRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225