BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0980.1
(378 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 197 7e-56
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 197 7e-56
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 159 1e-46
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 93 3e-22
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 54 4e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 197 bits (502), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 148/264 (56%), Gaps = 33/264 (12%)
Query: 98 NSVTLIDKLIIDLSAAFKMKDLGTLSYFLGIEVSASPLQHNMVLTQKKYTLQLLQKANLP 157
N+ +D+L L + FK++DLG L YFLG+E++ S N+ Q+KY L LL + L
Sbjct: 292 NNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINIC--QRKYALDLLDETGLL 349
Query: 158 ESKPSKLPVSSGQRVSITDGDELTSPTEYRSLVGALQYLTLTRPDISYAVNYAAQFMHKP 217
KPS +P+ S G + YR L+G L YL +TR DIS+AVN +QF P
Sbjct: 350 GCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAP 409
Query: 218 TSVHMIIVKKILRYLKGTMGSGI-------------------------------CITARS 246
H V KIL Y+KGT+G G+ C+ +
Sbjct: 410 RLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGT 469
Query: 247 SLLSWSSKKQATVARSSTEAEYKALSSVATEVIWISYLMSELRIPMNKPFVLYCDNISAK 306
SL+SW SKKQ V++SS EAEY+ALS E++W++ EL++P++KP +L+CDN +A
Sbjct: 470 SLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAI 529
Query: 307 YLASNPIFHARTKHIEVDFHYVRD 330
++A+N +FH RTKHIE D H VR+
Sbjct: 530 HIATNAVFHERTKHIESDCHSVRE 553
Score = 133 bits (335), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 82/116 (70%), Gaps = 6/116 (5%)
Query: 4 LGCKWVFKLKQKSDGTIERYKARLVAKGFHQQEGVDYEETFSPVVKATTIRLILTIAVTN 63
+GCKWV+K+K SDGTIERYKARLVAKG+ QQEG+D+ ETFSPV K T+++LIL I+
Sbjct: 127 IGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIY 186
Query: 64 SWIIKQLDVSNAFLHGTLDEAVYMIQPPGFTESG------NSVTLIDKLIIDLSAA 113
++ + QLD+SNAFL+G LDE +YM PPG+ N+V + K I L A
Sbjct: 187 NFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQA 242
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 197 bits (502), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 148/264 (56%), Gaps = 33/264 (12%)
Query: 98 NSVTLIDKLIIDLSAAFKMKDLGTLSYFLGIEVSASPLQHNMVLTQKKYTLQLLQKANLP 157
N+ +D+L L + FK++DLG L YFLG+E++ S N+ Q+KY L LL + L
Sbjct: 292 NNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINIC--QRKYALDLLDETGLL 349
Query: 158 ESKPSKLPVSSGQRVSITDGDELTSPTEYRSLVGALQYLTLTRPDISYAVNYAAQFMHKP 217
KPS +P+ S G + YR L+G L YL +TR DIS+AVN +QF P
Sbjct: 350 GCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAP 409
Query: 218 TSVHMIIVKKILRYLKGTMGSGI-------------------------------CITARS 246
H V KIL Y+KGT+G G+ C+ +
Sbjct: 410 RLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGT 469
Query: 247 SLLSWSSKKQATVARSSTEAEYKALSSVATEVIWISYLMSELRIPMNKPFVLYCDNISAK 306
SL+SW SKKQ V++SS EAEY+ALS E++W++ EL++P++KP +L+CDN +A
Sbjct: 470 SLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAI 529
Query: 307 YLASNPIFHARTKHIEVDFHYVRD 330
++A+N +FH RTKHIE D H VR+
Sbjct: 530 HIATNAVFHERTKHIESDCHSVRE 553
Score = 133 bits (335), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 82/116 (70%), Gaps = 6/116 (5%)
Query: 4 LGCKWVFKLKQKSDGTIERYKARLVAKGFHQQEGVDYEETFSPVVKATTIRLILTIAVTN 63
+GCKWV+K+K SDGTIERYKARLVAKG+ QQEG+D+ ETFSPV K T+++LIL I+
Sbjct: 127 IGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIY 186
Query: 64 SWIIKQLDVSNAFLHGTLDEAVYMIQPPGFTESG------NSVTLIDKLIIDLSAA 113
++ + QLD+SNAFL+G LDE +YM PPG+ N+V + K I L A
Sbjct: 187 NFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQA 242
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 159 bits (403), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 127/218 (58%), Gaps = 34/218 (15%)
Query: 96 SGNSVTLIDKLIIDLSAAFKMKDLGTLSYFLGIEVSASPLQHNMVLTQKKYTLQLLQKAN 155
+G+S TL++ LI LS+ F MKDLG + YFLGI++ P + L+Q KY Q+L A
Sbjct: 13 TGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHP--SGLFLSQTKYAEQILNNAG 70
Query: 156 LPESKPSKLPVSSGQRVSITDGDELTSPTEYRSLVGALQYLTLTRPDISYAVNYAAQFMH 215
+ + KP P+ S++ + P+++RS+VGALQYLTLTRPDISYAVN Q MH
Sbjct: 71 MLDCKPMSTPLPLKLNSSVSTA-KYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 129
Query: 216 KPTSVHMIIVKKILRYLKGTMGSGI--------------------CITARSS-------- 247
+PT ++K++LRY+KGT+ G+ C + R S
Sbjct: 130 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 189
Query: 248 ---LLSWSSKKQATVARSSTEAEYKALSSVATEVIWIS 282
++SWS+K+Q TV+RSSTE EY+AL+ A E+ W S
Sbjct: 190 GCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSS 227
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 92.8 bits (229), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 49/59 (83%)
Query: 2 NILGCKWVFKLKQKSDGTIERYKARLVAKGFHQQEGVDYEETFSPVVKATTIRLILTIA 60
NILGCKWVFK K SDGT++R KARLVAKGFHQ+EG+ + ET+SPVV+ TIR IL +A
Sbjct: 67 NILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 54.3 bits (129), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 195 YLTLTRPDISYAVNYAAQFMHKPTSVHMIIVKKILRYLKGTMGSGICITARSSLLSWSSK 254
YLT+TRPD+++AVN +QF + M V K+L Y+KGT+G G+ +A S L K
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDL---QLK 58
Query: 255 KQATVARSSTEAEYKALSSVATEV-IWISYLMSELRIPMNKPFVLYCDNISAKYL 308
A +S ++++ + V +W + LR + P +L NI A +L
Sbjct: 59 AFADSDWASCPDTRRSVTGFCSLVPLW---FLGALRKSILSPGLLQRQNIEALHL 110