BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1020.1
(474 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 175 6e-47
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 175 6e-47
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 118 5e-31
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 103 6e-25
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 54 1e-08
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 175 bits (443), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 117/179 (65%), Gaps = 4/179 (2%)
Query: 83 KEPTCYSEAKSDPKWCEAMPDEFNALIRNQTRTLVPRHPSMNSIGSKWVFRIKPKSDGTI 142
KEP+ Y+EAK WC AM DE A+ T + P+ IG KWV++IK SDGTI
Sbjct: 84 KEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTI 143
Query: 143 DRYKARLVAKGFNQQHGIDYDETFSPVVKPVTIRLVIGIAVTSGRKLTQLDVKNAFLHGL 202
+RYKARLVAKG+ QQ GID+ ETFSPV K +++L++ I+ L QLD+ NAFL+G
Sbjct: 144 ERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGD 203
Query: 203 LNKEVHMTQPTGFI----NTIYPDHVCKLNKALYGLKQAPRAWFHRFTSYLREIGFIAS 257
L++E++M P G+ +++ P+ VC L K++YGLKQA R WF +F+ L GF+ S
Sbjct: 204 LDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQS 262
Score = 137 bits (344), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 102/175 (58%), Gaps = 14/175 (8%)
Query: 251 EIGFIASKYQLFCQSSLPIYASPTDIHFAAVKRIFRYLKATLGRGLFFGNDNPPIFQNSH 310
+I F +K F ++ P H AV +I Y+K T+G+GLF+ + +
Sbjct: 394 DISFAVNKLSQFSEA-------PRLAHQQAVMKILHYIKGTVGQGLFYSS-------QAE 439
Query: 311 SQLVAYSDADWAGDPDTRRSILGNCIFFGSHLIQWASKKQPTVSRSSTEAEYRAMAIITV 370
QL +SDA + DTRRS G C+F G+ LI W SKKQ VS+SS EAEYRA++ T
Sbjct: 440 MQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATD 499
Query: 371 EIAWIQFLLCDLGVPMNNAPILYCDNVSATYMAHNPILHLRTKHMDLDYHFVRER 425
E+ W+ +L +P++ +L+CDN +A ++A N + H RTKH++ D H VRER
Sbjct: 500 EMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 175 bits (443), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 117/179 (65%), Gaps = 4/179 (2%)
Query: 83 KEPTCYSEAKSDPKWCEAMPDEFNALIRNQTRTLVPRHPSMNSIGSKWVFRIKPKSDGTI 142
KEP+ Y+EAK WC AM DE A+ T + P+ IG KWV++IK SDGTI
Sbjct: 84 KEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTI 143
Query: 143 DRYKARLVAKGFNQQHGIDYDETFSPVVKPVTIRLVIGIAVTSGRKLTQLDVKNAFLHGL 202
+RYKARLVAKG+ QQ GID+ ETFSPV K +++L++ I+ L QLD+ NAFL+G
Sbjct: 144 ERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGD 203
Query: 203 LNKEVHMTQPTGFI----NTIYPDHVCKLNKALYGLKQAPRAWFHRFTSYLREIGFIAS 257
L++E++M P G+ +++ P+ VC L K++YGLKQA R WF +F+ L GF+ S
Sbjct: 204 LDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQS 262
Score = 137 bits (344), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 102/175 (58%), Gaps = 14/175 (8%)
Query: 251 EIGFIASKYQLFCQSSLPIYASPTDIHFAAVKRIFRYLKATLGRGLFFGNDNPPIFQNSH 310
+I F +K F ++ P H AV +I Y+K T+G+GLF+ + +
Sbjct: 394 DISFAVNKLSQFSEA-------PRLAHQQAVMKILHYIKGTVGQGLFYSS-------QAE 439
Query: 311 SQLVAYSDADWAGDPDTRRSILGNCIFFGSHLIQWASKKQPTVSRSSTEAEYRAMAIITV 370
QL +SDA + DTRRS G C+F G+ LI W SKKQ VS+SS EAEYRA++ T
Sbjct: 440 MQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATD 499
Query: 371 EIAWIQFLLCDLGVPMNNAPILYCDNVSATYMAHNPILHLRTKHMDLDYHFVRER 425
E+ W+ +L +P++ +L+CDN +A ++A N + H RTKH++ D H VRER
Sbjct: 500 EMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 118 bits (295), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 83/137 (60%), Gaps = 12/137 (8%)
Query: 46 MVTRSKDGIVKPKVYDSLMATRHPVRFALFSSLPPLPKEPTCYSEAKSDPKWCEAMPDEF 105
M+TRSK GI K SL T + KEP A DP WC+AM +E
Sbjct: 1 MLTRSKAGINKLNPKYSLTIT------------TTIKKEPKSVIFALKDPGWCQAMQEEL 48
Query: 106 NALIRNQTRTLVPRHPSMNSIGSKWVFRIKPKSDGTIDRYKARLVAKGFNQQHGIDYDET 165
+AL RN+T LVP + N +G KWVF+ K SDGT+DR KARLVAKGF+Q+ GI + ET
Sbjct: 49 DALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVET 108
Query: 166 FSPVVKPVTIRLVIGIA 182
+SPVV+ TIR ++ +A
Sbjct: 109 YSPVVRTATIRTILNVA 125
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 103 bits (257), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 65/102 (63%), Gaps = 7/102 (6%)
Query: 273 PTDIHFAAVKRIFRYLKATLGRGLFFGNDNPPIFQNSHSQLVAYSDADWAGDPDTRRSIL 332
PT F +KR+ RY+K T+ GL+ I +NS + A+ D+DWAG TRRS
Sbjct: 131 PTLADFDLLKRVLRYVKGTIFHGLY-------IHKNSKLNVQAFCDSDWAGCTSTRRSTT 183
Query: 333 GNCIFFGSHLIQWASKKQPTVSRSSTEAEYRAMAIITVEIAW 374
G C F G ++I W++K+QPTVSRSSTE EYRA+A+ E+ W
Sbjct: 184 GFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 53.5 bits (127), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 7/56 (12%)
Query: 280 AVKRIFRYLKATLGRGLFFGNDNPPIFQNSHSQLVAYSDADWAGDPDTRRSILGNC 335
AV ++ Y+K T+G+GLF+ S QL A++D+DWA PDTRRS+ G C
Sbjct: 31 AVYKVLHYVKGTVGQGLFYS-------ATSDLQLKAFADSDWASCPDTRRSVTGFC 79