BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1040.1
(896 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G35910.1 | Polynucleotidyl transferase%2C ribonuclease H fold... 801 0.0
AT1G54440.4 | Polynucleotidyl transferase%2C ribonuclease H fold... 564 0.0
AT1G54440.5 | Polynucleotidyl transferase%2C ribonuclease H fold... 567 0.0
AT1G54440.2 | Polynucleotidyl transferase%2C ribonuclease H fold... 568 0.0
AT1G54440.1 | Polynucleotidyl transferase%2C ribonuclease H fold... 568 0.0
>AT5G35910.1 | Polynucleotidyl transferase%2C ribonuclease H fold
protein with HRDC domain-containing protein |
Chr5:14029871-14035405 REVERSE LENGTH=870 | 201606
Length = 870
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/921 (49%), Positives = 579/921 (62%), Gaps = 106/921 (11%)
Query: 15 KAEALQALINGPLPSSISKLSSSSRV-LPFNEDFHFYNNFEEFKTPVKVISDQSKSMLKS 73
K ++L+ LI+G SS SSS +P + DFHFY NF+EFK P+ I+ S+S L +
Sbjct: 16 KVKSLEKLIDGSSFSSTLSRLSSSSRLIPTSRDFHFYYNFDEFKRPIDEITGTSQSTLAT 75
Query: 74 IGFSKNPLGKSFPFPNDSDQ--SHDWLVDLNDEIYERLDSSLDEFQRIRKKEEETGKSNN 131
IG S+ GKS FP D D + DWL ++NDE+ ER D S+DEFQRIRKKE+E G+S
Sbjct: 76 IGDSEQVWGKSMKFPGDVDDVYAEDWLCNVNDELIERFDVSVDEFQRIRKKEKEIGRSVV 135
Query: 132 LMD-EDGFQLVCRKNKKGFSNDMEKEEGKFLSSSS-SVKVASRDNRTTGAKPKIPFHIPT 189
D +DGFQ+V K KK N + S VK+A RD ++G K K+PFH+PT
Sbjct: 136 ADDGDDGFQMVYGKKKKPVGNVVTGSAAVNGGGSVIDVKMAERDKNSSG-KAKVPFHVPT 194
Query: 190 IPRPQAEYNIHVNNFNQPFEHVWLNKSEDGCNFIHPLDNFSVLDFVDKNIGDGESVKPPP 249
I +PQ EYNI VNN N PFEHVWL +SED +HPL+ FSVLDFVDK++ + E VKP P
Sbjct: 195 IKKPQEEYNILVNNANLPFEHVWLERSEDDLRAMHPLEKFSVLDFVDKDVNEMEPVKPLP 254
Query: 250 LESTPFMLVEDVKQLKELAKKLRDVNEFAVDLEHNSYRSFQGMTCLMQISTRTEDFVVDT 309
LE TPF V++VK LKEL KLR V EFAVDLEHN YRSFQG+TCLMQISTRTED++VDT
Sbjct: 255 LEQTPFKFVQEVKDLKELVAKLRSVEEFAVDLEHNQYRSFQGLTCLMQISTRTEDYIVDT 314
Query: 310 LKLRVHVGPYLRELFKDPSKKKVMHGADRDILWLQRDFGIYVCNLFDTGQASRVLQLERN 369
KLR+H+GPYLRE+FKDP KKKVMHGADRDI+WLQRDFGIYVCNLFDTGQASRVL LERN
Sbjct: 315 FKLRIHIGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNLFDTGQASRVLNLERN 374
Query: 370 SLEFLLHHFCGVTANKEYQNADWRIRPIPDEMLRYAREDTHYLLHMFDLMKVKLRTASTS 429
SLEFLL HFCGVTANKEYQNADWRIRP+P+EM RYAREDTHYLL+++DL+K++L+ +
Sbjct: 375 SLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYIYDLIKLELQRMAKD 434
Query: 430 SEDGEDLLLEVYKRSCIICMQLYEKELLTDTSYLYIYGLQDADFNSQQLAVVAGLCAWRD 489
+ LLEVYKRS +C QLYEKELLT+ SYL++YGLQ A FN+ QLA+VAGLC WRD
Sbjct: 435 DAHTDSPLLEVYKRSYDVCTQLYEKELLTENSYLHVYGLQAAGFNAAQLAIVAGLCEWRD 494
Query: 490 AVARDEDESTGYILPNKALLEIGRHMPLTVSKLRRLVKSKHQYIEHHLLTVVGVIRNSIQ 549
+AR EDESTGY+LPNK LLEI + MP +V KLRR++KSKH YIE ++ +VV VIR S+Q
Sbjct: 495 FIARAEDESTGYVLPNKVLLEIAKEMPDSVGKLRRMLKSKHPYIERNVDSVVSVIRQSMQ 554
Query: 550 NAYAFEDVAEQLKERTEMASKPYMPVVPDEFEALPSSEDPAEMEAVVTQPEIIKYEVNQK 609
+ AFE A LK+ + P + +E + + ++ +V
Sbjct: 555 HYAAFESAALSLKDVS------------------PGNVMDKNIEPISEKKDLHTGDV--- 593
Query: 610 ENGVVEREASVVVKEKTSEMVHVNTFHFQQISGEVGDSKEGENSGSAEIKIAE--ATVQV 667
AS +KE +S++ I G ++ EG GS A+ A V++
Sbjct: 594 --------ASPSLKENSSQLESTRDL----IMG-AANTNEGRGLGSGLFGSAKVSAAVRI 640
Query: 668 LKKPNRGFGAFLGNSGSKRKLDPNSKDKAEIKVEQIKSSVTLPFHSFS-------GMNEQ 720
KKP+ G GA LGN+ SK+K + K K ++K+EQI+SSV L FHSF+ +E
Sbjct: 641 SKKPSSGLGALLGNAASKKKSRTDEKVKEDVKLEQIRSSVNLSFHSFTEKVPDSKSTSET 700
Query: 721 STSLGGERTEPSDIPTSTEPVPESAEVTKLDEIISFGTDKNND----GTNG--------- 767
S + G+ E S ST P A V+K D + D GT+G
Sbjct: 701 SPKVYGKPEEMS----STMP----ASVSKEDGVKELKDDSEEASEIVGTSGRVSESKVSS 752
Query: 768 ---------STGLESETD--DEPVSLSELSTSFQKCFKPKAETRNTQQVERSQESEVGLA 816
G E + D DEP+SLSELST+FQKCFK +++ Q+ +
Sbjct: 753 SEMGDIILLENGDEKKVDAEDEPMSLSELSTNFQKCFKSMNKSKKAQK-------QTEFL 805
Query: 817 QFKPFDYAAAREESIWF-GREGKEKRKESENHDNKNKTDSKERRKKPVMLRMPKEDEVKE 875
+PFDY AAR+E + G +G++ ++E+ K T E E
Sbjct: 806 NIEPFDYEAARKEVKFGEGHKGRQGKREAAAGQKKGST-----------------QEQSE 848
Query: 876 FQQARRRQAFPQSGNRSTTFR 896
F Q +RRQAFP SGNRS +F+
Sbjct: 849 FGQGKRRQAFPASGNRSMSFK 869
>AT1G54440.4 | Polynucleotidyl transferase%2C ribonuclease H fold
protein with HRDC domain-containing protein |
Chr1:20323284-20326980 FORWARD LENGTH=488 | 201606
Length = 488
Score = 564 bits (1454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 270/457 (59%), Positives = 336/457 (73%), Gaps = 34/457 (7%)
Query: 108 RLDSSLDEFQRIRKKEEETGKSNNLMDEDGFQLVCRKNKKGFSNDMEKEEGKFLSSSSSV 167
R D +DEF+R RK EE++ K ++ ++ KGF+ KF
Sbjct: 2 RFDDPMDEFKRNRKMEEDSKKVIDVK--------VAESDKGFA--------KF------- 38
Query: 168 KVASRDNRTTGAKPKIPFHIPTIPRPQAEYNIHVNNFNQPFEHVWLNKSEDGCNFIHPLD 227
K ++PFHIPT+ +PQ EY I V+N N PFEHV L KSEDG FIHPL+
Sbjct: 39 -----------GKAEVPFHIPTLTKPQEEYKILVDNANNPFEHVLLEKSEDGLRFIHPLE 87
Query: 228 NFSVLDFVDKNIGDGESVKPPPLESTPFMLVEDVKQLKELAKKLRDVNEFAVDLEHNSYR 287
SV+DFVD+N+ + VKP PLE TPF LVE+VK L++LA L+ V EFAVDLEHN YR
Sbjct: 88 ELSVMDFVDRNLSEMRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYR 147
Query: 288 SFQGMTCLMQISTRTEDFVVDTLKLRVHVGPYLRELFKDPSKKKVMHGADRDILWLQRDF 347
+FQG+TCLMQISTRTED++VD KL H+GPYLRELFKDP KKKV+HGADRDI+WLQRDF
Sbjct: 148 TFQGLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDF 207
Query: 348 GIYVCNLFDTGQASRVLQLERNSLEFLLHHFCGVTANKEYQNADWRIRPIPDEMLRYARE 407
GIYVCNLFDTGQASRVL+LERNSLEFLL H+CGV ANKEYQ ADWRIRP+PD M RYARE
Sbjct: 208 GIYVCNLFDTGQASRVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYARE 267
Query: 408 DTHYLLHMFDLMKVKLRTASTSSEDGEDLLLEVYKRSCIICMQLYEKELLTDTSYLYIYG 467
DTHYLL+++D+M+++L T + E + L+EVYKRS +CMQLYEKEL T SYL++YG
Sbjct: 268 DTHYLLYIYDVMRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVYG 327
Query: 468 LQDADFNSQQLAVVAGLCAWRDAVARDEDESTGYILPNKALLEIGRHMPLTVSKLRRLVK 527
+Q + N+ QL++VAGLC WRD +AR +DESTGY+LPNK L +I + MP+ V++LRRL+K
Sbjct: 328 VQTGNLNAVQLSIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLLK 387
Query: 528 SKHQYIEHHLLTVVGVIRNSIQNAYAFEDVAEQLKER 564
SK Y+E + V+ VIR S+QNA AFE V + LK+R
Sbjct: 388 SKLPYLERNFDAVISVIRRSMQNAAAFEPVVQSLKDR 424
>AT1G54440.5 | Polynucleotidyl transferase%2C ribonuclease H fold
protein with HRDC domain-containing protein |
Chr1:20323284-20327931 FORWARD LENGTH=584 | 201606
Length = 584
Score = 567 bits (1461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 270/457 (59%), Positives = 336/457 (73%), Gaps = 34/457 (7%)
Query: 108 RLDSSLDEFQRIRKKEEETGKSNNLMDEDGFQLVCRKNKKGFSNDMEKEEGKFLSSSSSV 167
R D +DEF+R RK EE++ K ++ ++ KGF+ KF
Sbjct: 2 RFDDPMDEFKRNRKMEEDSKKVIDVK--------VAESDKGFA--------KF------- 38
Query: 168 KVASRDNRTTGAKPKIPFHIPTIPRPQAEYNIHVNNFNQPFEHVWLNKSEDGCNFIHPLD 227
K ++PFHIPT+ +PQ EY I V+N N PFEHV L KSEDG FIHPL+
Sbjct: 39 -----------GKAEVPFHIPTLTKPQEEYKILVDNANNPFEHVLLEKSEDGLRFIHPLE 87
Query: 228 NFSVLDFVDKNIGDGESVKPPPLESTPFMLVEDVKQLKELAKKLRDVNEFAVDLEHNSYR 287
SV+DFVD+N+ + VKP PLE TPF LVE+VK L++LA L+ V EFAVDLEHN YR
Sbjct: 88 ELSVMDFVDRNLSEMRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYR 147
Query: 288 SFQGMTCLMQISTRTEDFVVDTLKLRVHVGPYLRELFKDPSKKKVMHGADRDILWLQRDF 347
+FQG+TCLMQISTRTED++VD KL H+GPYLRELFKDP KKKV+HGADRDI+WLQRDF
Sbjct: 148 TFQGLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDF 207
Query: 348 GIYVCNLFDTGQASRVLQLERNSLEFLLHHFCGVTANKEYQNADWRIRPIPDEMLRYARE 407
GIYVCNLFDTGQASRVL+LERNSLEFLL H+CGV ANKEYQ ADWRIRP+PD M RYARE
Sbjct: 208 GIYVCNLFDTGQASRVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYARE 267
Query: 408 DTHYLLHMFDLMKVKLRTASTSSEDGEDLLLEVYKRSCIICMQLYEKELLTDTSYLYIYG 467
DTHYLL+++D+M+++L T + E + L+EVYKRS +CMQLYEKEL T SYL++YG
Sbjct: 268 DTHYLLYIYDVMRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVYG 327
Query: 468 LQDADFNSQQLAVVAGLCAWRDAVARDEDESTGYILPNKALLEIGRHMPLTVSKLRRLVK 527
+Q + N+ QL++VAGLC WRD +AR +DESTGY+LPNK L +I + MP+ V++LRRL+K
Sbjct: 328 VQTGNLNAVQLSIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLLK 387
Query: 528 SKHQYIEHHLLTVVGVIRNSIQNAYAFEDVAEQLKER 564
SK Y+E + V+ VIR S+QNA AFE V + LK+R
Sbjct: 388 SKLPYLERNFDAVISVIRRSMQNAAAFEPVVQSLKDR 424
>AT1G54440.2 | Polynucleotidyl transferase%2C ribonuclease H fold
protein with HRDC domain-containing protein |
Chr1:20323284-20327931 FORWARD LENGTH=639 | 201606
Length = 639
Score = 568 bits (1464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 270/457 (59%), Positives = 336/457 (73%), Gaps = 34/457 (7%)
Query: 108 RLDSSLDEFQRIRKKEEETGKSNNLMDEDGFQLVCRKNKKGFSNDMEKEEGKFLSSSSSV 167
R D +DEF+R RK EE++ K ++ ++ KGF+ KF
Sbjct: 2 RFDDPMDEFKRNRKMEEDSKKVIDVK--------VAESDKGFA--------KF------- 38
Query: 168 KVASRDNRTTGAKPKIPFHIPTIPRPQAEYNIHVNNFNQPFEHVWLNKSEDGCNFIHPLD 227
K ++PFHIPT+ +PQ EY I V+N N PFEHV L KSEDG FIHPL+
Sbjct: 39 -----------GKAEVPFHIPTLTKPQEEYKILVDNANNPFEHVLLEKSEDGLRFIHPLE 87
Query: 228 NFSVLDFVDKNIGDGESVKPPPLESTPFMLVEDVKQLKELAKKLRDVNEFAVDLEHNSYR 287
SV+DFVD+N+ + VKP PLE TPF LVE+VK L++LA L+ V EFAVDLEHN YR
Sbjct: 88 ELSVMDFVDRNLSEMRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYR 147
Query: 288 SFQGMTCLMQISTRTEDFVVDTLKLRVHVGPYLRELFKDPSKKKVMHGADRDILWLQRDF 347
+FQG+TCLMQISTRTED++VD KL H+GPYLRELFKDP KKKV+HGADRDI+WLQRDF
Sbjct: 148 TFQGLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDF 207
Query: 348 GIYVCNLFDTGQASRVLQLERNSLEFLLHHFCGVTANKEYQNADWRIRPIPDEMLRYARE 407
GIYVCNLFDTGQASRVL+LERNSLEFLL H+CGV ANKEYQ ADWRIRP+PD M RYARE
Sbjct: 208 GIYVCNLFDTGQASRVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYARE 267
Query: 408 DTHYLLHMFDLMKVKLRTASTSSEDGEDLLLEVYKRSCIICMQLYEKELLTDTSYLYIYG 467
DTHYLL+++D+M+++L T + E + L+EVYKRS +CMQLYEKEL T SYL++YG
Sbjct: 268 DTHYLLYIYDVMRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVYG 327
Query: 468 LQDADFNSQQLAVVAGLCAWRDAVARDEDESTGYILPNKALLEIGRHMPLTVSKLRRLVK 527
+Q + N+ QL++VAGLC WRD +AR +DESTGY+LPNK L +I + MP+ V++LRRL+K
Sbjct: 328 VQTGNLNAVQLSIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLLK 387
Query: 528 SKHQYIEHHLLTVVGVIRNSIQNAYAFEDVAEQLKER 564
SK Y+E + V+ VIR S+QNA AFE V + LK+R
Sbjct: 388 SKLPYLERNFDAVISVIRRSMQNAAAFEPVVQSLKDR 424
>AT1G54440.1 | Polynucleotidyl transferase%2C ribonuclease H fold
protein with HRDC domain-containing protein |
Chr1:20323284-20327931 FORWARD LENGTH=637 | 201606
Length = 637
Score = 568 bits (1463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 270/457 (59%), Positives = 335/457 (73%), Gaps = 34/457 (7%)
Query: 108 RLDSSLDEFQRIRKKEEETGKSNNLMDEDGFQLVCRKNKKGFSNDMEKEEGKFLSSSSSV 167
R D +DEF+R RK EE++ K + ++ KGF+ KF
Sbjct: 2 RFDDPMDEFKRNRKMEEDSKKV--------IDVKVAESDKGFA--------KF------- 38
Query: 168 KVASRDNRTTGAKPKIPFHIPTIPRPQAEYNIHVNNFNQPFEHVWLNKSEDGCNFIHPLD 227
K ++PFHIPT+ +PQ EY I V+N N PFEHV L KSEDG FIHPL+
Sbjct: 39 -----------GKAEVPFHIPTLTKPQEEYKILVDNANNPFEHVLLEKSEDGLRFIHPLE 87
Query: 228 NFSVLDFVDKNIGDGESVKPPPLESTPFMLVEDVKQLKELAKKLRDVNEFAVDLEHNSYR 287
SV+DFVD+N+ + VKP PLE TPF LVE+VK L++LA L+ V EFAVDLEHN YR
Sbjct: 88 ELSVMDFVDRNLSEMRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYR 147
Query: 288 SFQGMTCLMQISTRTEDFVVDTLKLRVHVGPYLRELFKDPSKKKVMHGADRDILWLQRDF 347
+FQG+TCLMQISTRTED++VD KL H+GPYLRELFKDP KKKV+HGADRDI+WLQRDF
Sbjct: 148 TFQGLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDF 207
Query: 348 GIYVCNLFDTGQASRVLQLERNSLEFLLHHFCGVTANKEYQNADWRIRPIPDEMLRYARE 407
GIYVCNLFDTGQASRVL+LERNSLEFLL H+CGV ANKEYQ ADWRIRP+PD M RYARE
Sbjct: 208 GIYVCNLFDTGQASRVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYARE 267
Query: 408 DTHYLLHMFDLMKVKLRTASTSSEDGEDLLLEVYKRSCIICMQLYEKELLTDTSYLYIYG 467
DTHYLL+++D+M+++L T + E + L+EVYKRS +CMQLYEKEL T SYL++YG
Sbjct: 268 DTHYLLYIYDVMRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVYG 327
Query: 468 LQDADFNSQQLAVVAGLCAWRDAVARDEDESTGYILPNKALLEIGRHMPLTVSKLRRLVK 527
+Q + N+ QL++VAGLC WRD +AR +DESTGY+LPNK L +I + MP+ V++LRRL+K
Sbjct: 328 VQTGNLNAVQLSIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLLK 387
Query: 528 SKHQYIEHHLLTVVGVIRNSIQNAYAFEDVAEQLKER 564
SK Y+E + V+ VIR S+QNA AFE V + LK+R
Sbjct: 388 SKLPYLERNFDAVISVIRRSMQNAAAFEPVVQSLKDR 424