BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1090.1
(713 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 143 4e-35
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 143 4e-35
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 102 3e-24
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 143 bits (361), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 127/246 (51%), Gaps = 31/246 (12%)
Query: 492 ETKYIVELLKKAELLHCRPSIVPVSHDKRVSKLDGTLLNDPLLYRSIVGGLQYATMTRPY 551
+ KY ++LL + LL C+PS VP+ S G D YR ++G L Y +TR
Sbjct: 335 QRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLD 394
Query: 552 I---------------------------YRKGTLGVGITITS-GDCSTLCGLDSDWGSCP 583
I Y KGT+G G+ +S + D+ + SC
Sbjct: 395 ISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCK 454
Query: 584 DSRRPTSSYCIFLGSTLICWSFKKEQTFSGSSTMAEYRALSLTTSELLWTSYLLKELRVT 643
D+RR T+ YC+FLG++LI W KK+Q S SS AEYRALS T E++W + +EL++
Sbjct: 455 DTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLP 514
Query: 644 IQLHMVLYCDNMGAKYLASNPVFHVRTKYVEIDLHFIRDL-VKQHQLEVKFVSSDHNLAD 702
+ +L+CDN A ++A+N VFH RTK++E D H +R+ V Q L F + D D
Sbjct: 515 LSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--D 572
Query: 703 VFTEGL 708
FTE L
Sbjct: 573 GFTEYL 578
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 143 bits (361), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 127/246 (51%), Gaps = 31/246 (12%)
Query: 492 ETKYIVELLKKAELLHCRPSIVPVSHDKRVSKLDGTLLNDPLLYRSIVGGLQYATMTRPY 551
+ KY ++LL + LL C+PS VP+ S G D YR ++G L Y +TR
Sbjct: 335 QRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLD 394
Query: 552 I---------------------------YRKGTLGVGITITS-GDCSTLCGLDSDWGSCP 583
I Y KGT+G G+ +S + D+ + SC
Sbjct: 395 ISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCK 454
Query: 584 DSRRPTSSYCIFLGSTLICWSFKKEQTFSGSSTMAEYRALSLTTSELLWTSYLLKELRVT 643
D+RR T+ YC+FLG++LI W KK+Q S SS AEYRALS T E++W + +EL++
Sbjct: 455 DTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLP 514
Query: 644 IQLHMVLYCDNMGAKYLASNPVFHVRTKYVEIDLHFIRDL-VKQHQLEVKFVSSDHNLAD 702
+ +L+CDN A ++A+N VFH RTK++E D H +R+ V Q L F + D D
Sbjct: 515 LSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--D 572
Query: 703 VFTEGL 708
FTE L
Sbjct: 573 GFTEYL 578
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 102 bits (254), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 87/175 (49%), Gaps = 33/175 (18%)
Query: 490 FKETKYIVELLKKAELLHCRPSIVPVSHDKRVSKLDGTLLNDPLLYRSIVGGLQYATMTR 549
+TKY ++L A +L C+P P+ K S + DP +RSIVG LQY T+TR
Sbjct: 56 LSQTKYAEQILNNAGMLDCKPMSTPLPL-KLNSSVSTAKYPDPSDFRSIVGALQYLTLTR 114
Query: 550 PYI---------------------------YRKGTLGVGITI---TSGDCSTLCGLDSDW 579
P I Y KGT+ G+ I + + C DSDW
Sbjct: 115 PDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFC--DSDW 172
Query: 580 GSCPDSRRPTSSYCIFLGSTLICWSFKKEQTFSGSSTMAEYRALSLTTSELLWTS 634
C +RR T+ +C FLG +I WS K++ T S SST EYRAL+LT +EL W+S
Sbjct: 173 AGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSS 227