BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1120.1
(215 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 231 9e-77
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 185 1e-53
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 185 1e-53
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 85 4e-21
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 231 bits (589), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 146/195 (74%)
Query: 1 MKVLGELNYFLGVEVTKFNEGLFLSQQKYAKEILSSTDMDECKPVKTPLATKNDLHSPST 60
MK LG ++YFLG+++ GLFLSQ KYA++IL++ M +CKP+ TPL K + +
Sbjct: 33 MKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTA 92
Query: 61 QLVDATEYRRLVGSLQYLTLTRLDITHAVNYVSQFMHQPTRQHLQAVKRILRYVQGTIDF 120
+ D +++R +VG+LQYLTLTR DI++AVN V Q MH+PT +KR+LRYV+GTI
Sbjct: 93 KYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFH 152
Query: 121 GLRLLSNSTLDLYSFSDADWAGCPSTRRSTTGYCLYLGANCISWTSKRQPTVSRSSTEAE 180
GL + NS L++ +F D+DWAGC STRRSTTG+C +LG N ISW++KRQPTVSRSSTE E
Sbjct: 153 GLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETE 212
Query: 181 YRAMASTTAELTWTT 195
YRA+A T AELTW++
Sbjct: 213 YRALALTAAELTWSS 227
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 185 bits (469), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 127/208 (61%), Gaps = 1/208 (0%)
Query: 1 MKVLGELNYFLGVEVTKFNEGLFLSQQKYAKEILSSTDMDECKPVKTPLATKNDLHSPST 60
++ LG L YFLG+E+ + G+ + Q+KYA ++L T + CKP P+ + S
Sbjct: 310 LRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG 369
Query: 61 -QLVDATEYRRLVGSLQYLTLTRLDITHAVNYVSQFMHQPTRQHLQAVKRILRYVQGTID 119
VDA YRRL+G L YL +TRLDI+ AVN +SQF P H QAV +IL Y++GT+
Sbjct: 370 GDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVG 429
Query: 120 FGLRLLSNSTLDLYSFSDADWAGCPSTRRSTTGYCLYLGANCISWTSKRQPTVSRSSTEA 179
GL S + + L FSDA + C TRRST GYC++LG + ISW SK+Q VS+SS EA
Sbjct: 430 QGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEA 489
Query: 180 EYRAMASTTAELTWTTYLLTDLVFPCTK 207
EYRA++ T E+ W +L P +K
Sbjct: 490 EYRALSFATDEMMWLAQFFRELQLPLSK 517
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 185 bits (469), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 127/208 (61%), Gaps = 1/208 (0%)
Query: 1 MKVLGELNYFLGVEVTKFNEGLFLSQQKYAKEILSSTDMDECKPVKTPLATKNDLHSPST 60
++ LG L YFLG+E+ + G+ + Q+KYA ++L T + CKP P+ + S
Sbjct: 310 LRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG 369
Query: 61 -QLVDATEYRRLVGSLQYLTLTRLDITHAVNYVSQFMHQPTRQHLQAVKRILRYVQGTID 119
VDA YRRL+G L YL +TRLDI+ AVN +SQF P H QAV +IL Y++GT+
Sbjct: 370 GDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVG 429
Query: 120 FGLRLLSNSTLDLYSFSDADWAGCPSTRRSTTGYCLYLGANCISWTSKRQPTVSRSSTEA 179
GL S + + L FSDA + C TRRST GYC++LG + ISW SK+Q VS+SS EA
Sbjct: 430 QGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEA 489
Query: 180 EYRAMASTTAELTWTTYLLTDLVFPCTK 207
EYRA++ T E+ W +L P +K
Sbjct: 490 EYRALSFATDEMMWLAQFFRELQLPLSK 517
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 84.7 bits (208), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 77 YLTLTRLDITHAVNYVSQFMHQPTRQHLQAVKRILRYVQGTIDFGLRLLSNSTLDLYSFS 136
YLT+TR D+T AVN +SQF +QAV ++L YV+GT+ GL + S L L +F+
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 137 DADWAGCPSTRRSTTGYC 154
D+DWA CP TRRS TG+C
Sbjct: 62 DSDWASCPDTRRSVTGFC 79