BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1130.1
(108 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G54410.1 | dehydrin family protein | Chr1:20310305-20310601 R... 46 2e-07
>AT1G54410.1 | dehydrin family protein | Chr1:20310305-20310601
REVERSE LENGTH=98 | 201606
Length = 98
Score = 45.8 bits (107), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 15/73 (20%)
Query: 1 MSGIMNKIGEALHIGGDDHKGVEKHNEQIKKHEEHNEEKKHDEHKEGKKHNEGGDHKEGF 60
M+G++NKIG+ALHIGG N++ + +E +K DEHK G +HKEG
Sbjct: 1 MAGLINKIGDALHIGGG--------NKEGEHKKEEEHKKHVDEHKSG-------EHKEGI 45
Query: 61 MEKIKDKIHGEEG 73
++KIKDKIHG EG
Sbjct: 46 VDKIKDKIHGGEG 58