BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1260.1
(220 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G27140.1 | HSP20-like chaperones superfamily protein | Chr2:1... 104 3e-27
AT5G20970.1 | HSP20-like chaperones superfamily protein | Chr5:7... 92 3e-22
AT1G54400.1 | HSP20-like chaperones superfamily protein | Chr1:2... 85 2e-20
AT5G04890.1 | HSP20-like chaperones superfamily protein | Chr5:1... 77 3e-16
AT3G10680.1 | HSP20-like chaperones superfamily protein | Chr3:3... 59 5e-10
>AT2G27140.1 | HSP20-like chaperones superfamily protein |
Chr2:11598496-11599264 REVERSE LENGTH=224 | 201606
Length = 224
Score = 104 bits (259), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 64/93 (68%)
Query: 7 AHFTRSYDDFEPSFNWVREEGLDTLVLHLPGFKKEQLRVQVDTHGNLKVTGERPLEERKW 66
A+ R YD+FEP NW E+G + L ++LPGF+KEQL+VQV T L+V G+RP KW
Sbjct: 8 ANANRIYDEFEPLSNWKTEQGFEALTIYLPGFRKEQLKVQVTTTRKLRVMGDRPAGANKW 67
Query: 67 SRFRKDFPVPNYCNVNDINAKFIGGLLYIKFPK 99
RFRK+FP+P +V+ ++AKF G L ++ P+
Sbjct: 68 IRFRKEFPIPPNIDVDSVSAKFEGANLVVRLPR 100
>AT5G20970.1 | HSP20-like chaperones superfamily protein |
Chr5:7123132-7124001 FORWARD LENGTH=249 | 201606
Length = 249
Score = 91.7 bits (226), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 59/102 (57%)
Query: 11 RSYDDFEPSFNWVREEGLDTLVLHLPGFKKEQLRVQVDTHGNLKVTGERPLEERKWSRFR 70
R Y +FEP+ W E + LV LPGFKKEQL+V V L++TGERP KW RF
Sbjct: 8 RVYQEFEPATRWTSEPDAEVLVADLPGFKKEQLKVSVTATRKLRLTGERPTGGNKWIRFH 67
Query: 71 KDFPVPNYCNVNDINAKFIGGLLYIKFPKKPIQIIPQNQPTP 112
++ PVP +++ ++A F LYI+ PK +I PTP
Sbjct: 68 QEIPVPLTVDIDSVSAMFKDNKLYIRHPKLKTEIPQTKPPTP 109
>AT1G54400.1 | HSP20-like chaperones superfamily protein |
Chr1:20307667-20308768 FORWARD LENGTH=183 | 201606
Length = 183
Score = 85.1 bits (209), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 6 QAHFTRSYDDFEPSFNWVREEGLDTLVLHLP-GFKKEQLRVQVDTHGNLKVTGERPLEER 64
Q HF YD+ EP W R E +D L LHLP G KKE L++Q++ G L +TG P+++
Sbjct: 9 QTHF---YDEIEPFCRWRRTEDIDILELHLPSGLKKEHLKIQINNSGVLTITGGCPVDQT 65
Query: 65 KWSRFRKDFPVPNYCNVNDINAKFIGGLLYIKFPKK-PIQI---IPQNQPTPQQET 116
K RF K+ V C N+I AKF G+LY+ PK PI + TPQ +T
Sbjct: 66 KTIRFMKETKVAKDCKRNEIRAKFSKGVLYVTMPKTIPIAAGLSVSLKGATPQHQT 121
>AT5G04890.1 | HSP20-like chaperones superfamily protein |
Chr5:1427217-1428390 FORWARD LENGTH=366 | 201606
Length = 366
Score = 76.6 bits (187), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 9 FTRSYDDFEPSFNWVREEGLDTLVLHLPGFKKEQLRVQ-VDTHGNLKVTGERPLEERKWS 67
F Y+DF P W + L + L GF KEQ++V V + ++VTGERPL RKWS
Sbjct: 12 FGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWS 71
Query: 68 RFRKDFPVPNYCNVNDINAKFIGGLLYIKFPKKPI 102
RF + F VP C V+ I+ F +L I PK+ I
Sbjct: 72 RFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETI 106
>AT3G10680.1 | HSP20-like chaperones superfamily protein |
Chr3:3337773-3339345 FORWARD LENGTH=490 | 201606
Length = 490
Score = 58.9 bits (141), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 16 FEPSFNWVREEGLDTLVLHLPGFKKEQLRVQVDTHG-NLKVTGERPLEERKWSRFRKDFP 74
F+P W L ++LPGF ++Q+ ++ D +++ G+RPL + +RF + +
Sbjct: 26 FKPRAQWTNSGSSIFLYVNLPGFYRDQIEIKKDERTRTVQIQGQRPLSAQTKARFSEAYR 85
Query: 75 VPNYCNVNDINAKFIGGLLYIKFPKKPIQIIPQN-QPTPQQETSSIGQNISSDR 127
VP+ C++ ++ F GLL I+FP I+ N Q Q+ IGQ + ++
Sbjct: 86 VPDTCDMTKLSTSFSHGLLTIEFP----AIVEANKQEKAVQDQEKIGQRSNQEK 135