BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1270.1
(74 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G21760.2 | F-box protein 7 | Chr1:7649512-7651613 FORWARD LEN... 54 4e-10
AT1G21760.1 | F-box protein 7 | Chr1:7649324-7651613 FORWARD LEN... 54 4e-10
>AT1G21760.2 | F-box protein 7 | Chr1:7649512-7651613 FORWARD
LENGTH=328 | 201606
Length = 328
Score = 53.9 bits (128), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 23 DLYGVRIKPFVHFESSGSTPYVDPALIHCCLPNELLHEV 61
DLYGV ++P F S+ P+ DPALIH CLP+ELL EV
Sbjct: 32 DLYGVHVRPVPPFGSTSRKPHFDPALIHRCLPDELLFEV 70
>AT1G21760.1 | F-box protein 7 | Chr1:7649324-7651613 FORWARD
LENGTH=328 | 201606
Length = 328
Score = 53.9 bits (128), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 23 DLYGVRIKPFVHFESSGSTPYVDPALIHCCLPNELLHEV 61
DLYGV ++P F S+ P+ DPALIH CLP+ELL EV
Sbjct: 32 DLYGVHVRPVPPFGSTSRKPHFDPALIHRCLPDELLFEV 70