BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000034.1_g1270.1
         (74 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21760.2 | F-box protein 7 | Chr1:7649512-7651613 FORWARD LEN...    54   4e-10
AT1G21760.1 | F-box protein 7 | Chr1:7649324-7651613 FORWARD LEN...    54   4e-10

>AT1G21760.2 | F-box protein 7 | Chr1:7649512-7651613 FORWARD
          LENGTH=328 | 201606
          Length = 328

 Score = 53.9 bits (128), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/39 (58%), Positives = 28/39 (71%)

Query: 23 DLYGVRIKPFVHFESSGSTPYVDPALIHCCLPNELLHEV 61
          DLYGV ++P   F S+   P+ DPALIH CLP+ELL EV
Sbjct: 32 DLYGVHVRPVPPFGSTSRKPHFDPALIHRCLPDELLFEV 70


>AT1G21760.1 | F-box protein 7 | Chr1:7649324-7651613 FORWARD
          LENGTH=328 | 201606
          Length = 328

 Score = 53.9 bits (128), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/39 (58%), Positives = 28/39 (71%)

Query: 23 DLYGVRIKPFVHFESSGSTPYVDPALIHCCLPNELLHEV 61
          DLYGV ++P   F S+   P+ DPALIH CLP+ELL EV
Sbjct: 32 DLYGVHVRPVPPFGSTSRKPHFDPALIHRCLPDELLFEV 70


Top