BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1330.1
(146 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 112 3e-29
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 112 3e-29
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 77 1e-17
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 112 bits (279), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 70/100 (70%)
Query: 8 DTRRSTSGFSIFLGRNLLTWSARKQPTVSRSNTEAEYRALASTTADLTWIGYILRELGIR 67
DTRRST+G+ +FLG +L++W ++KQ VS+S+ EAEYRAL+ T ++ W+ REL +
Sbjct: 455 DTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLP 514
Query: 68 LSTPISIYCDNKSVILMTANPVFHGRSKHIALDYHFVREK 107
LS P ++CDN + I + N VFH R+KHI D H VRE+
Sbjct: 515 LSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 112 bits (279), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 70/100 (70%)
Query: 8 DTRRSTSGFSIFLGRNLLTWSARKQPTVSRSNTEAEYRALASTTADLTWIGYILRELGIR 67
DTRRST+G+ +FLG +L++W ++KQ VS+S+ EAEYRAL+ T ++ W+ REL +
Sbjct: 455 DTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLP 514
Query: 68 LSTPISIYCDNKSVILMTANPVFHGRSKHIALDYHFVREK 107
LS P ++CDN + I + N VFH R+KHI D H VRE+
Sbjct: 515 LSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 77.0 bits (188), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 42/48 (87%)
Query: 9 TRRSTSGFSIFLGRNLLTWSARKQPTVSRSNTEAEYRALASTTADLTW 56
TRRST+GF FLG N+++WSA++QPTVSRS+TE EYRALA T A+LTW
Sbjct: 178 TRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225