BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1340.1
(125 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G42170.2 | BED zinc finger and hAT dimerization domain-contai... 42 4e-05
AT3G42170.1 | BED zinc finger and hAT dimerization domain-contai... 42 4e-05
>AT3G42170.2 | BED zinc finger and hAT dimerization
domain-containing protein DAYSLEEPER |
Chr3:14321838-14323928 FORWARD LENGTH=674 | 201606
Length = 674
Score = 42.4 bits (98), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 7 RTEINDWCCNEDSIMVAMADNMKKKYDKYWGNYEKMNVYLFISVILDPRQKEEGLTLCFE 66
+++++ ED + +A M++K DKYW + ++ L ++V++DPR K + + F
Sbjct: 452 QSDLSRAIAGEDPFVTGIAKTMQEKVDKYWRD---CSLVLAMAVVMDPRFKMKLVEFSFS 508
Query: 67 VLFGEHEAVELTNRVKRTLFQMYGEYKLVHFGVEQQTQSQDSTINSNKDDNTNLRDGT 124
+FGE +A + V + +++ EY + Q T S+ + D +T + + T
Sbjct: 509 KIFGE-DAGKNIKTVDDGIHELFTEY--MALPSPQNTTSEGGKADGLSDFDTYIMETT 563
>AT3G42170.1 | BED zinc finger and hAT dimerization
domain-containing protein DAYSLEEPER |
Chr3:14321838-14323928 FORWARD LENGTH=696 | 201606
Length = 696
Score = 42.0 bits (97), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 7 RTEINDWCCNEDSIMVAMADNMKKKYDKYWGNYEKMNVYLFISVILDPRQKEEGLTLCFE 66
+++++ ED + +A M++K DKYW + ++ L ++V++DPR K + + F
Sbjct: 474 QSDLSRAIAGEDPFVTGIAKTMQEKVDKYWRD---CSLVLAMAVVMDPRFKMKLVEFSFS 530
Query: 67 VLFGEHEAVELTNRVKRTLFQMYGEYKLVHFGVEQQTQSQDSTINSNKDDNTNLRDGT 124
+FGE +A + V + +++ EY + Q T S+ + D +T + + T
Sbjct: 531 KIFGE-DAGKNIKTVDDGIHELFTEY--MALPSPQNTTSEGGKADGLSDFDTYIMETT 585