BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000034.1_g1340.1
         (125 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G42170.2 | BED zinc finger and hAT dimerization domain-contai...    42   4e-05
AT3G42170.1 | BED zinc finger and hAT dimerization domain-contai...    42   4e-05

>AT3G42170.2 | BED zinc finger and hAT dimerization
           domain-containing protein DAYSLEEPER |
           Chr3:14321838-14323928 FORWARD LENGTH=674 | 201606
          Length = 674

 Score = 42.4 bits (98), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 6/118 (5%)

Query: 7   RTEINDWCCNEDSIMVAMADNMKKKYDKYWGNYEKMNVYLFISVILDPRQKEEGLTLCFE 66
           +++++     ED  +  +A  M++K DKYW +    ++ L ++V++DPR K + +   F 
Sbjct: 452 QSDLSRAIAGEDPFVTGIAKTMQEKVDKYWRD---CSLVLAMAVVMDPRFKMKLVEFSFS 508

Query: 67  VLFGEHEAVELTNRVKRTLFQMYGEYKLVHFGVEQQTQSQDSTINSNKDDNTNLRDGT 124
            +FGE +A +    V   + +++ EY  +     Q T S+    +   D +T + + T
Sbjct: 509 KIFGE-DAGKNIKTVDDGIHELFTEY--MALPSPQNTTSEGGKADGLSDFDTYIMETT 563


>AT3G42170.1 | BED zinc finger and hAT dimerization
           domain-containing protein DAYSLEEPER |
           Chr3:14321838-14323928 FORWARD LENGTH=696 | 201606
          Length = 696

 Score = 42.0 bits (97), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 6/118 (5%)

Query: 7   RTEINDWCCNEDSIMVAMADNMKKKYDKYWGNYEKMNVYLFISVILDPRQKEEGLTLCFE 66
           +++++     ED  +  +A  M++K DKYW +    ++ L ++V++DPR K + +   F 
Sbjct: 474 QSDLSRAIAGEDPFVTGIAKTMQEKVDKYWRD---CSLVLAMAVVMDPRFKMKLVEFSFS 530

Query: 67  VLFGEHEAVELTNRVKRTLFQMYGEYKLVHFGVEQQTQSQDSTINSNKDDNTNLRDGT 124
            +FGE +A +    V   + +++ EY  +     Q T S+    +   D +T + + T
Sbjct: 531 KIFGE-DAGKNIKTVDDGIHELFTEY--MALPSPQNTTSEGGKADGLSDFDTYIMETT 585


Top