BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000034.1_g1350.1
         (172 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G42170.1 | BED zinc finger and hAT dimerization domain-contai...    75   5e-16
AT3G42170.2 | BED zinc finger and hAT dimerization domain-contai...    75   5e-16
AT1G18560.1 | BED zinc finger and hAT dimerization domain-contai...    51   1e-07

>AT3G42170.1 | BED zinc finger and hAT dimerization
           domain-containing protein DAYSLEEPER |
           Chr3:14321838-14323928 FORWARD LENGTH=696 | 201606
          Length = 696

 Score = 75.1 bits (183), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 48/72 (66%)

Query: 10  PKDTSFDILCWWKVNSSKYKILSYIARDILAIPVSTVASESAFNTRNRVLDQFRSSLSPT 69
           P+   FD+L WWK N  KY  LS +ARDIL+IPVS  A +  F+   R +D++++SL P 
Sbjct: 603 PRVQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPE 662

Query: 70  TVKKLICAQNLL 81
           TV+ LICA+  L
Sbjct: 663 TVEALICAREWL 674


>AT3G42170.2 | BED zinc finger and hAT dimerization
           domain-containing protein DAYSLEEPER |
           Chr3:14321838-14323928 FORWARD LENGTH=674 | 201606
          Length = 674

 Score = 75.1 bits (183), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 48/72 (66%)

Query: 10  PKDTSFDILCWWKVNSSKYKILSYIARDILAIPVSTVASESAFNTRNRVLDQFRSSLSPT 69
           P+   FD+L WWK N  KY  LS +ARDIL+IPVS  A +  F+   R +D++++SL P 
Sbjct: 581 PRVQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPE 640

Query: 70  TVKKLICAQNLL 81
           TV+ LICA+  L
Sbjct: 641 TVEALICAREWL 652


>AT1G18560.1 | BED zinc finger and hAT dimerization
           domain-containing protein | Chr1:6385614-6388005 FORWARD
           LENGTH=690 | 201606
          Length = 690

 Score = 50.8 bits (120), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 16  DILCWWKVNSSKYKILSYIARDILAIPVSTVASESAFNTRNRVLDQFRSSLSPTTVKKLI 75
           D+L WWKVNS +Y  LS +ARD LA+  ++ A E  F  +   +D+ +  +   + + +I
Sbjct: 584 DVLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEEIFCGKGEEIDKQKYCMPHDSTQSVI 643

Query: 76  CAQNLLRKKQKL 87
           C ++ +    KL
Sbjct: 644 CIRSWIEAGMKL 655


Top