BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1360.1
(272 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G27140.1 | HSP20-like chaperones superfamily protein | Chr2:1... 86 1e-19
AT5G20970.1 | HSP20-like chaperones superfamily protein | Chr5:7... 82 3e-18
AT1G54400.1 | HSP20-like chaperones superfamily protein | Chr1:2... 79 1e-17
AT5G04890.1 | HSP20-like chaperones superfamily protein | Chr5:1... 66 5e-12
>AT2G27140.1 | HSP20-like chaperones superfamily protein |
Chr2:11598496-11599264 REVERSE LENGTH=224 | 201606
Length = 224
Score = 85.5 bits (210), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 58/91 (63%)
Query: 9 ARRLYEDIEPSSELVQEEGVDTLLLQLSGFNEKQVKVQLGESGNLKVIGERPIGGNKWIR 68
A R+Y++ EP S E+G + L + L GF ++Q+KVQ+ + L+V+G+RP G NKWIR
Sbjct: 10 ANRIYDEFEPLSNWKTEQGFEALTIYLPGFRKEQLKVQVTTTRKLRVMGDRPAGANKWIR 69
Query: 69 FQKEYQIALNCKENEIRATFEDQTLFVTMPK 99
F+KE+ I N + + A FE L V +P+
Sbjct: 70 FRKEFPIPPNIDVDSVSAKFEGANLVVRLPR 100
>AT5G20970.1 | HSP20-like chaperones superfamily protein |
Chr5:7123132-7124001 FORWARD LENGTH=249 | 201606
Length = 249
Score = 82.0 bits (201), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Query: 11 RLYEDIEPSSELVQEEGVDTLLLQLSGFNEKQVKVQLGESGNLKVIGERPIGGNKWIRFQ 70
R+Y++ EP++ E + L+ L GF ++Q+KV + + L++ GERP GGNKWIRF
Sbjct: 8 RVYQEFEPATRWTSEPDAEVLVADLPGFKKEQLKVSVTATRKLRLTGERPTGGNKWIRFH 67
Query: 71 KEYQIALNCKENEIRATFEDQTLFVTMPKKVNQPREGENEDQETESKSEPRVLQPLQDHE 130
+E + L + + A F+D L++ PK + E +T+ + P +++P HE
Sbjct: 68 QEIPVPLTVDIDSVSAMFKDNKLYIRHPK-------LKTEIPQTKPPT-PVIMKPHDQHE 119
>AT1G54400.1 | HSP20-like chaperones superfamily protein |
Chr1:20307667-20308768 FORWARD LENGTH=183 | 201606
Length = 183
Score = 79.0 bits (193), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 12 LYEDIEPSSELVQEEGVDTLLLQL-SGFNEKQVKVQLGESGNLKVIGERPIGGNKWIRFQ 70
Y++IEP + E +D L L L SG ++ +K+Q+ SG L + G P+ K IRF
Sbjct: 12 FYDEIEPFCRWRRTEDIDILELHLPSGLKKEHLKIQINNSGVLTITGGCPVDQTKTIRFM 71
Query: 71 KEYQIALNCKENEIRATFEDQTLFVTMPKKV 101
KE ++A +CK NEIRA F L+VTMPK +
Sbjct: 72 KETKVAKDCKRNEIRAKFSKGVLYVTMPKTI 102
>AT5G04890.1 | HSP20-like chaperones superfamily protein |
Chr5:1427217-1428390 FORWARD LENGTH=366 | 201606
Length = 366
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 13 YEDIEPSSELVQEEGVDTLLLQLSGFNEKQVKVQ-LGESGNLKVIGERPIGGNKWIRFQK 71
YED P SE + L + L+GF ++Q+KV + S ++V GERP+ KW RF +
Sbjct: 16 YEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNE 75
Query: 72 EYQIALNCKENEIRATFEDQTLFVTMPK 99
+ + NC ++I +F++ L +TMPK
Sbjct: 76 VFTVPQNCLVDKIHGSFKNNVLTITMPK 103