BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1490.1
(228 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27870.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 68 1e-13
AT3G25270.1 | Ribonuclease H-like superfamily protein | Chr3:920... 64 9e-12
AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 59 4e-10
AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 58 7e-10
AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143... 59 7e-10
>AT1G27870.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr1:9706657-9707298 REVERSE
LENGTH=213 | 201606
Length = 213
Score = 67.8 bits (164), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 40 DVNTVIKSINTFPKISAEKVNHDKVVISKWQPPTQPFVKINVDASFVNVVQIIGTSLIVH 99
+ NTV + INT + E+ NHD+ W+ P + ++K N D SFVN +V
Sbjct: 29 EANTVAQ-INTRSRGVREEDNHDR-----WRRPERGWIKCNFDGSFVNGDVKSKAGWVVR 82
Query: 100 DYRSKFIFASVNIGR-ARNSEEGEALAILNGITWAKENNYMQVIIESDNINLIKHLNNSK 158
D ++ A IGR N+ E E A++ + + Y +V E DN L +N SK
Sbjct: 83 DSNGSYLLAGQAIGRKVDNALESEIQALIISMQHCWSHGYKRVCFEGDNKMLFDLINGSK 142
Query: 159 HQVQWQSLVHIRQIRNVKKEMHQVKFNYIKRDQNTQADKLAK 200
V + IR I ++ + FN+I+R NT AD LAK
Sbjct: 143 --VYFGVHNWIRDIHWWLRKFESIHFNWIRRHHNTPADILAK 182
>AT3G25270.1 | Ribonuclease H-like superfamily protein |
Chr3:9203934-9204965 REVERSE LENGTH=343 | 201606
Length = 343
Score = 63.9 bits (154), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 22/198 (11%)
Query: 21 ILWYIWKTRCDHCFQQSVY-----------------DVNTVIKSINTFPKISAEKVNHDK 63
ILW +WK+R FQQ D NT ++S+N ++ + +
Sbjct: 123 ILWRLWKSRNQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQ--QVHSSRHQQPT 180
Query: 64 VVISKWQPPTQPFVKINVDASFVNVVQIIGTSLIVHDYRSKFIFASVNIGR-ARNSEEGE 122
+ +KWQ P ++K N D +F + + ++ D ++ + IG +S E E
Sbjct: 181 MARTKWQRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDSLESE 240
Query: 123 ALAILNGITWAKENNYMQVIIESDNINLIKHLNNSKHQVQWQSLVHIRQIRNVKKEMHQV 182
A++ + A Y +VI E D+ + + +NN K + + IR+ R +K +
Sbjct: 241 FQALIIAMQHAWSQGYRKVIFEGDSKQVEELMNNEK--LNFGRFNWIREGRFWQKRFEEA 298
Query: 183 KFNYIKRDQNTQADKLAK 200
F ++ R N AD LAK
Sbjct: 299 VFKWVPRTNNQPADILAK 316
>AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:14484959-14485837 FORWARD
LENGTH=292 | 201606
Length = 292
Score = 58.9 bits (141), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 14/191 (7%)
Query: 21 ILWYIWKTRCDHCFQQSVYDVNTVI-KSINTFPKISAEKVNHDKV--------VISKWQP 71
+LW +WK+R + F+ YD V+ +++ F + S + K + +W+
Sbjct: 80 LLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEGKASGPQVERNLSVQWKA 139
Query: 72 PTQPFVKINVDASFVNVVQIIGTSLIVHDYRSKFIFASVN-IGRARNSEEGEALAILNGI 130
P +VK N DA++ G I+ + ++ + R +N E E A+ +
Sbjct: 140 PPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAELEALRWAV 199
Query: 131 TWAKENNYMQVIIESDNINLIKHLNNSKHQVQWQSL-VHIRQIRNVKKEMHQVKFNYIKR 189
NY ++I ESD L+ LN+ W +L + I+ + +VKF + R
Sbjct: 200 LTMSRFNYKRIIFESDAQALVNLLNSDDF---WPTLQPALEDIQQLLHHFEEVKFEFTPR 256
Query: 190 DQNTQADKLAK 200
N AD++A+
Sbjct: 257 GGNKVADRIAR 267
>AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:1535561-1536226 FORWARD
LENGTH=221 | 201606
Length = 221
Score = 57.8 bits (138), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 26/199 (13%)
Query: 22 LWYIWKTRCDHCFQ-----------------QSVYDVNTVIKSINTFPKISAEKVNHDKV 64
+W +W++R FQ Q + I+S+N + E N+ +
Sbjct: 1 MWRLWRSRNQLVFQHQNLSWQSTLKRAKDDVQEWENAQEYIQSLNHY--TVREGCNNRES 58
Query: 65 VISKWQPPTQPFVKINVDASFVNVVQIIGTSLIVHDYRSKFIFASVNIGRARNS---EEG 121
KW+ P ++K N D SF Q + ++ D + + A+ +G N+ E
Sbjct: 59 THQKWEQPPMGWIKCNYDGSFNYRTQQTNSGWLIRDDKGFYKGAAQAVGGTMNNALESEL 118
Query: 122 EALAILNGITWAKENNYMQVIIESDNINLIKHLNNSKHQVQWQSLVHIRQIRNVKKEMHQ 181
+AL + TW++ Y +VI E D+ + + LN + Q+ + + IR+ + K +
Sbjct: 119 QALVMAMQHTWSQ--GYRKVIFEGDSKQVEELLN--RKQMHFGAFNWIREAWSWSKRFEE 174
Query: 182 VKFNYIKRDQNTQADKLAK 200
V F++ R N AD LAK
Sbjct: 175 VIFSWTPRTNNQPADMLAK 193
>AT4G29090.1 | Ribonuclease H-like superfamily protein |
Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
Length = 575
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 21 ILWYIWKTRCDHCFQQSVYDVNTVIKS---------INTFPKISAEKVNHDKVVISKWQP 71
+LW +WK R + F+ ++ V++ I T + K ++ +W+P
Sbjct: 363 LLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGRWRP 422
Query: 72 PTQPFVKINVDASFVNVVQIIGTSLIVHDYRSKFIFASVN-IGRARNSEEGEALAILNGI 130
P +VK N DA++ + G ++ + + + + + + ++ E E A+ +
Sbjct: 423 PPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAV 482
Query: 131 TWAKENNYMQVIIESDNINLIKHLNNSKHQVQWQSL-VHIRQIRNVKKEMHQVKFNYIKR 189
Y VI ESD+ LI+ LNN + W SL I+ ++ + + +VKF +I R
Sbjct: 483 LSLSRFQYNYVIFESDSQVLIEILNNDEI---WPSLKPTIQDLQRLLSQFTEVKFVFIPR 539
Query: 190 DQNTQADKLAK 200
+ NT A+++A+
Sbjct: 540 EGNTLAERVAR 550