BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1500.1
(1043 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 441 e-137
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 441 e-137
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 184 2e-52
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 98 4e-23
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 61 8e-11
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 441 bits (1133), Expect = e-137, Method: Compositional matrix adjust.
Identities = 222/543 (40%), Positives = 338/543 (62%), Gaps = 17/543 (3%)
Query: 463 SVVEDVPEAPSEPPKKILPSRQTRGIPKPTYEPE-----LSSRVKYPMSQYVSDHRLSES 517
++ DVPE P R+TR KP Y + ++S + +SQ++S ++S
Sbjct: 21 NIQNDVPE-----PSVHTSHRRTR---KPAYLQDYYCHSVASLTIHDISQFLSYEKVSPL 72
Query: 518 NKSFVNQLSTVYIPNNVQEALSDSKWKAAMNEEMKSLQKNDTWELVDRPEDKTPVGCRWI 577
SF+ ++ P+ EA W AM++E+ +++ TWE+ P +K P+GC+W+
Sbjct: 73 YHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWV 132
Query: 578 YSVKYKADGTIERYKARLVAKGYTQTYGVDYTETFALVAKINTVRVLLSLAANLDWPLQQ 637
Y +KY +DGTIERYKARLVAKGYTQ G+D+ ETF+ V K+ +V+++L+++A ++ L Q
Sbjct: 133 YKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQ 192
Query: 638 FDVKNAFLHGELLEEVYMDLPPGCKIPQ---IHNQKVCRLKKSLYGLKQSPRAWFGRFTK 694
D+ NAFL+G+L EE+YM LPPG Q + VC LKKS+YGLKQ+ R WF +F+
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252
Query: 695 AMKEFGYHQSNSDHTLFTKRQKGKLTALIVYVDDMVVTGDDPEERKALQNYLSKEFEMKD 754
+ FG+ QS+SDHT F K ++VYVDD+++ ++ L++ L F+++D
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312
Query: 755 LGPLKYFLGIEVSRSSNGIFLSQRKYTLDLLHEVGMSACEPIDTPVEEGLKLSVEPNQIP 814
LGPLKYFLG+E++RS+ GI + QRKY LDLL E G+ C+P P++ + S
Sbjct: 313 LGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372
Query: 815 VDNGRYQRLVGRLMYLAYTRPDLAYALSIVSQFMHNPGEKHMNAVLRILRYLKAAPGKGI 874
VD Y+RL+GRLMYL TR D+++A++ +SQF P H AV++IL Y+K G+G+
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432
Query: 875 LFTKNSSCRTIDVYTGADWVGEVNGRRSTAGYFTFVGGNLVIWRSKKQNVVARSSAESEF 934
++ + + + V++ A + + RRST GY F+G +L+ W+SKKQ VV++SSAE+E+
Sbjct: 433 FYSSQAEMQ-LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 491
Query: 935 RGMADGICEALWLRLLLDDLGYPSERPIQLFCDNKAACDIAHNPVQHDRTKHVEVDRCFI 994
R ++ E +WL +L P +P LFCDN AA IA N V H+RTKH+E D +
Sbjct: 492 RALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSV 551
Query: 995 KEK 997
+E+
Sbjct: 552 RER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 441 bits (1133), Expect = e-137, Method: Compositional matrix adjust.
Identities = 222/543 (40%), Positives = 338/543 (62%), Gaps = 17/543 (3%)
Query: 463 SVVEDVPEAPSEPPKKILPSRQTRGIPKPTYEPE-----LSSRVKYPMSQYVSDHRLSES 517
++ DVPE P R+TR KP Y + ++S + +SQ++S ++S
Sbjct: 21 NIQNDVPE-----PSVHTSHRRTR---KPAYLQDYYCHSVASLTIHDISQFLSYEKVSPL 72
Query: 518 NKSFVNQLSTVYIPNNVQEALSDSKWKAAMNEEMKSLQKNDTWELVDRPEDKTPVGCRWI 577
SF+ ++ P+ EA W AM++E+ +++ TWE+ P +K P+GC+W+
Sbjct: 73 YHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWV 132
Query: 578 YSVKYKADGTIERYKARLVAKGYTQTYGVDYTETFALVAKINTVRVLLSLAANLDWPLQQ 637
Y +KY +DGTIERYKARLVAKGYTQ G+D+ ETF+ V K+ +V+++L+++A ++ L Q
Sbjct: 133 YKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQ 192
Query: 638 FDVKNAFLHGELLEEVYMDLPPGCKIPQ---IHNQKVCRLKKSLYGLKQSPRAWFGRFTK 694
D+ NAFL+G+L EE+YM LPPG Q + VC LKKS+YGLKQ+ R WF +F+
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252
Query: 695 AMKEFGYHQSNSDHTLFTKRQKGKLTALIVYVDDMVVTGDDPEERKALQNYLSKEFEMKD 754
+ FG+ QS+SDHT F K ++VYVDD+++ ++ L++ L F+++D
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312
Query: 755 LGPLKYFLGIEVSRSSNGIFLSQRKYTLDLLHEVGMSACEPIDTPVEEGLKLSVEPNQIP 814
LGPLKYFLG+E++RS+ GI + QRKY LDLL E G+ C+P P++ + S
Sbjct: 313 LGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372
Query: 815 VDNGRYQRLVGRLMYLAYTRPDLAYALSIVSQFMHNPGEKHMNAVLRILRYLKAAPGKGI 874
VD Y+RL+GRLMYL TR D+++A++ +SQF P H AV++IL Y+K G+G+
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432
Query: 875 LFTKNSSCRTIDVYTGADWVGEVNGRRSTAGYFTFVGGNLVIWRSKKQNVVARSSAESEF 934
++ + + + V++ A + + RRST GY F+G +L+ W+SKKQ VV++SSAE+E+
Sbjct: 433 FYSSQAEMQ-LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 491
Query: 935 RGMADGICEALWLRLLLDDLGYPSERPIQLFCDNKAACDIAHNPVQHDRTKHVEVDRCFI 994
R ++ E +WL +L P +P LFCDN AA IA N V H+RTKH+E D +
Sbjct: 492 RALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSV 551
Query: 995 KEK 997
+E+
Sbjct: 552 RER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 184 bits (467), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 134/225 (59%), Gaps = 2/225 (0%)
Query: 722 LIVYVDDMVVTGDDPEERKALQNYLSKEFEMKDLGPLKYFLGIEVSRSSNGIFLSQRKYT 781
L++YVDD+++TG L LS F MKDLGP+ YFLGI++ +G+FLSQ KY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 782 LDLLHEVGMSACEPIDTPVEEGLKLSVEPNQIPVDNGRYQRLVGRLMYLAYTRPDLAYAL 841
+L+ GM C+P+ TP+ L SV + P D ++ +VG L YL TRPD++YA+
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAV 121
Query: 842 SIVSQFMHNPGEKHMNAVLRILRYLKAAPGKGILFTKNSSCRTIDVYTGADWVGEVNGRR 901
+IV Q MH P + + R+LRY+K G+ KNS + + +DW G + RR
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN-VQAFCDSDWAGCTSTRR 180
Query: 902 STAGYFTFVGGNLVIWRSKKQNVVARSSAESEFRGMADGICEALW 946
ST G+ TF+G N++ W +K+Q V+RSS E+E+R +A E W
Sbjct: 181 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 97.8 bits (242), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 67/102 (65%)
Query: 531 PNNVQEALSDSKWKAAMNEEMKSLQKNDTWELVDRPEDKTPVGCRWIYSVKYKADGTIER 590
P +V AL D W AM EE+ +L +N TW LV P ++ +GC+W++ K +DGT++R
Sbjct: 28 PKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDR 87
Query: 591 YKARLVAKGYTQTYGVDYTETFALVAKINTVRVLLSLAANLD 632
KARLVAKG+ Q G+ + ET++ V + T+R +L++A L+
Sbjct: 88 LKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLE 129
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 60.8 bits (146), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 828 MYLAYTRPDLAYALSIVSQFMHNPGEKHMNAVLRILRYLKAAPGKGILFTKNSSCRTIDV 887
MYL TRPDL +A++ +SQF M AV ++L Y+K G+G+ ++ S + +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQ-LKA 59
Query: 888 YTGADWVGEVNGRRSTAGYFTFV 910
+ +DW + RRS G+ + V
Sbjct: 60 FADSDWASCPDTRRSVTGFCSLV 82