BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1530.1
(1113 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 251 8e-69
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 251 8e-69
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 180 5e-51
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 93 4e-22
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 50 5e-07
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 251 bits (641), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 125/274 (45%), Positives = 171/274 (62%), Gaps = 4/274 (1%)
Query: 812 WTITDLPSGKRAIGWIKVSRSSKGIFLCQRKYALDIIKDSGLSACRPSPFPMEQKLRLSP 871
+ + DL K +G ++++RS+ GI +CQRKYALD++ ++GL C+PS PM+ + S
Sbjct: 308 FKLRDLGPLKYFLG-LEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSA 366
Query: 872 SDGDPLPDPTVYRRLIGRLLYLTVTRPDICYAVNNLSQFLQKPSTTHLDVAHRVLRYVKG 931
G D YRRLIGRL+YL +TR DI +AVN LSQF + P H ++L Y+KG
Sbjct: 367 HSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKG 426
Query: 932 SIGHGLLLSSSSSLHITGYCDSDWAGCPSTLRSTTGYFTMLDFSPLSWKSKKQPTIAKSS 991
++G GL SS + + + + D+ + C T RST GY L S +SWKSKKQ ++KSS
Sbjct: 427 TVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSS 486
Query: 992 AEAEYRALAHLTSELQWLKYLLKDLGITHSSPMTVHCDNKAALHIADNPVFHERTKHIEI 1051
AEAEYRAL+ T E+ WL ++L + S P + CDN AA+HIA N VFHERTKHIE
Sbjct: 487 AEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIES 546
Query: 1052 DCHFVREK-IKANVIAPRFTPTSEQLADIFTKPL 1084
DCH VRE+ + ++ F EQ D FT+ L
Sbjct: 547 DCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYL 578
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 67/118 (56%), Gaps = 6/118 (5%)
Query: 721 PDGPIHPSRPSRNRRPPTHLNDYICHSYPDSDVVYPLTQYLNFEQFSGSHQVFLNSVITT 780
P+ +H S R R P +L DY CHS S ++ ++Q+L++E+ S + FL +
Sbjct: 27 PEPSVHTSH--RRTRKPAYLQDYYCHSVA-SLTIHDISQFLSYEKVSPLYHSFLVCIAKA 83
Query: 781 VEPTSFSQAVKSPHWREAMSKEIAALESNNTWTITDLPSGKRAIG--WI-KVSRSSKG 835
EP+++++A + W AM EI A+E+ +TW I LP K+ IG W+ K+ +S G
Sbjct: 84 KEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 251 bits (641), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 125/274 (45%), Positives = 171/274 (62%), Gaps = 4/274 (1%)
Query: 812 WTITDLPSGKRAIGWIKVSRSSKGIFLCQRKYALDIIKDSGLSACRPSPFPMEQKLRLSP 871
+ + DL K +G ++++RS+ GI +CQRKYALD++ ++GL C+PS PM+ + S
Sbjct: 308 FKLRDLGPLKYFLG-LEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSA 366
Query: 872 SDGDPLPDPTVYRRLIGRLLYLTVTRPDICYAVNNLSQFLQKPSTTHLDVAHRVLRYVKG 931
G D YRRLIGRL+YL +TR DI +AVN LSQF + P H ++L Y+KG
Sbjct: 367 HSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKG 426
Query: 932 SIGHGLLLSSSSSLHITGYCDSDWAGCPSTLRSTTGYFTMLDFSPLSWKSKKQPTIAKSS 991
++G GL SS + + + + D+ + C T RST GY L S +SWKSKKQ ++KSS
Sbjct: 427 TVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSS 486
Query: 992 AEAEYRALAHLTSELQWLKYLLKDLGITHSSPMTVHCDNKAALHIADNPVFHERTKHIEI 1051
AEAEYRAL+ T E+ WL ++L + S P + CDN AA+HIA N VFHERTKHIE
Sbjct: 487 AEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIES 546
Query: 1052 DCHFVREK-IKANVIAPRFTPTSEQLADIFTKPL 1084
DCH VRE+ + ++ F EQ D FT+ L
Sbjct: 547 DCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYL 578
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 67/118 (56%), Gaps = 6/118 (5%)
Query: 721 PDGPIHPSRPSRNRRPPTHLNDYICHSYPDSDVVYPLTQYLNFEQFSGSHQVFLNSVITT 780
P+ +H S R R P +L DY CHS S ++ ++Q+L++E+ S + FL +
Sbjct: 27 PEPSVHTSH--RRTRKPAYLQDYYCHSVA-SLTIHDISQFLSYEKVSPLYHSFLVCIAKA 83
Query: 781 VEPTSFSQAVKSPHWREAMSKEIAALESNNTWTITDLPSGKRAIG--WI-KVSRSSKG 835
EP+++++A + W AM EI A+E+ +TW I LP K+ IG W+ K+ +S G
Sbjct: 84 KEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 180 bits (457), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 131/200 (65%), Gaps = 2/200 (1%)
Query: 809 NNTWTITDLPSGKRAIGWIKVSRSSKGIFLCQRKYALDIIKDSGLSACRPSPFPMEQKLR 868
++T+++ DL +G I++ G+FL Q KYA I+ ++G+ C+P P+ KL
Sbjct: 28 SSTFSMKDLGPVHYFLG-IQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN 86
Query: 869 LSPSDGDPLPDPTVYRRLIGRLLYLTVTRPDICYAVNNLSQFLQKPSTTHLDVAHRVLRY 928
S S PDP+ +R ++G L YLT+TRPDI YAVN + Q + +P+ D+ RVLRY
Sbjct: 87 SSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRY 145
Query: 929 VKGSIGHGLLLSSSSSLHITGYCDSDWAGCPSTLRSTTGYFTMLDFSPLSWKSKKQPTIA 988
VKG+I HGL + +S L++ +CDSDWAGC ST RSTTG+ T L + +SW +K+QPT++
Sbjct: 146 VKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVS 205
Query: 989 KSSAEAEYRALAHLTSELQW 1008
+SS E EYRALA +EL W
Sbjct: 206 RSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 93.2 bits (230), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 56/82 (68%)
Query: 891 LYLTVTRPDICYAVNNLSQFLQKPSTTHLDVAHRVLRYVKGSIGHGLLLSSSSSLHITGY 950
+YLT+TRPD+ +AVN LSQF T + ++VL YVKG++G GL S++S L + +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 951 CDSDWAGCPSTLRSTTGYFTML 972
DSDWA CP T RS TG+ +++
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 501 HRHILEVARSLRLQAHLPISFWGECVLTAVYLINKLPTPTLQGISPHEKLLGSPPKFDHL 560
+R I+E RS+ + LP +F + TAV++INK P+ + P E S P + +L
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 561 RVFGCLCFTRRPLVKTKLDSRASPG 585
R FGC+ + + KL RA G
Sbjct: 62 RRFGCVAYIH--CDEGKLKPRAKKG 84