BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1630.1
(291 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 141 2e-37
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 141 2e-37
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 103 4e-26
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 68 4e-14
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 141 bits (355), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 148/295 (50%), Gaps = 18/295 (6%)
Query: 1 MDVVTAYLYGSLDSDIYMKILDGYNLPKTSKLGSSNMYSIKLQRSLYGLKQSGRMWYNRL 60
+D+ A+L G LD +IYMK+ GY + L + + L++S+YGLKQ+ R W+ +
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAV--CYLKKSIYGLKQASRQWFLKF 250
Query: 61 SEYLLKEGYINNAICPCVFIKKSENGFAIIAVYVDDLNLVGTPEE-LTKTAEYLKKEFEM 119
S L+ G++ + F+K + F + VYVDD+ + + + + LK F++
Sbjct: 251 SVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKL 310
Query: 120 KDLGKTKFCLGLQIEHLQNGIFIHQSMYTEKVLKRFYMDKAHPLSSPMIVRSLDEKKDP- 178
+DLG K+ LGL+I GI I Q Y +L + P S PM DP
Sbjct: 311 RDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPM---------DPS 361
Query: 179 --FRPREDDEDLLGVEVPYLSAIGALMYLATCTRPDIAFAVNLLARYSSAPTKRHWNGVK 236
F D + + Y IG LMYL TR DI+FAVN L+++S AP H V
Sbjct: 362 VTFSAHSGG-DFVDAKA-YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVM 418
Query: 237 HILRYLRGTTDMGLFYSKGIKSQLCGYADAGYLSDPHSARSQTGYLFTSGNTAIS 291
IL Y++GT GLFYS + QL ++DA + S + RS GY G + IS
Sbjct: 419 KILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLIS 473
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 141 bits (355), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 148/295 (50%), Gaps = 18/295 (6%)
Query: 1 MDVVTAYLYGSLDSDIYMKILDGYNLPKTSKLGSSNMYSIKLQRSLYGLKQSGRMWYNRL 60
+D+ A+L G LD +IYMK+ GY + L + + L++S+YGLKQ+ R W+ +
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAV--CYLKKSIYGLKQASRQWFLKF 250
Query: 61 SEYLLKEGYINNAICPCVFIKKSENGFAIIAVYVDDLNLVGTPEE-LTKTAEYLKKEFEM 119
S L+ G++ + F+K + F + VYVDD+ + + + + LK F++
Sbjct: 251 SVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKL 310
Query: 120 KDLGKTKFCLGLQIEHLQNGIFIHQSMYTEKVLKRFYMDKAHPLSSPMIVRSLDEKKDP- 178
+DLG K+ LGL+I GI I Q Y +L + P S PM DP
Sbjct: 311 RDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPM---------DPS 361
Query: 179 --FRPREDDEDLLGVEVPYLSAIGALMYLATCTRPDIAFAVNLLARYSSAPTKRHWNGVK 236
F D + + Y IG LMYL TR DI+FAVN L+++S AP H V
Sbjct: 362 VTFSAHSGG-DFVDAKA-YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVM 418
Query: 237 HILRYLRGTTDMGLFYSKGIKSQLCGYADAGYLSDPHSARSQTGYLFTSGNTAIS 291
IL Y++GT GLFYS + QL ++DA + S + RS GY G + IS
Sbjct: 419 KILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLIS 473
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 103 bits (257), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 90 IAVYVDDLNLVGTPEELTKTAEY-LKKEFEMKDLGKTKFCLGLQIEHLQNGIFIHQSMYT 148
+ +YVDD+ L G+ L + L F MKDLG + LG+QI+ +G+F+ Q+ Y
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 149 EKVLKRFYMDKAHPLSSPMIVR---SLDEKKDPFRPREDDEDLLGVEVPYLSAIGALMYL 205
E++L M P+S+P+ ++ S+ K P D D + S +GAL YL
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-----DPSD-------FRSIVGALQYL 110
Query: 206 ATCTRPDIAFAVNLLARYSSAPTKRHWNGVKHILRYLRGTTDMGLFYSKGIKSQLCGYAD 265
T TRPDI++AVN++ + PT ++ +K +LRY++GT GL+ K K + + D
Sbjct: 111 -TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 169
Query: 266 AGYLSDPHSARSQTGYLFTSGNTAIS 291
+ + + RS TG+ G IS
Sbjct: 170 SDWAGCTSTRRSTTGFCTFLGCNIIS 195
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 67.8 bits (164), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 203 MYLATCTRPDIAFAVNLLARYSSAPTKRHWNGVKHILRYLRGTTDMGLFYSKGIKSQLCG 262
MYL T TRPD+ FAVN L+++SSA V +L Y++GT GLFYS QL
Sbjct: 1 MYL-TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 263 YADAGYLSDPHSARSQTGY 281
+AD+ + S P + RS TG+
Sbjct: 60 FADSDWASCPDTRRSVTGF 78