BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1790.1
(111 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 64 2e-13
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 60 1e-11
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 60 1e-11
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 43 2e-06
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 64.3 bits (155), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 2 DRVPYASAVGSLMYAIVCTRPDISHPVSVVNRFMANPGKTHWEVVKWVLRYLKGTIDTTL 61
D + S VG+L Y + TRPDIS+ V++V + M P ++++K VLRY+KGTI L
Sbjct: 96 DPSDFRSIVGALQY-LTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGL 154
Query: 62 CFGGDT-CQVSGYVDSNYVGDLDRRQSTTGYVFRVHGALVSWRSMLQSTIA 111
++ V + DS++ G R+STTG+ + ++SW + Q T++
Sbjct: 155 YIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVS 205
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 60.5 bits (145), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 1 MDRVPYASAVGSLMYAIVCTRPDISHPVSVVNRFMANPGKTHWEVVKWVLRYLKGTIDTT 60
+D Y +G LMY + TR DIS V+ +++F P H + V +L Y+KGT+
Sbjct: 373 VDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 431
Query: 61 LCFGGDT-CQVSGYVDSNYVGDLDRRQSTTGYVFRVHGALVSWRSMLQSTIA 111
L + Q+ + D+++ D R+ST GY + +L+SW+S Q ++
Sbjct: 432 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVS 483
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 60.5 bits (145), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 1 MDRVPYASAVGSLMYAIVCTRPDISHPVSVVNRFMANPGKTHWEVVKWVLRYLKGTIDTT 60
+D Y +G LMY + TR DIS V+ +++F P H + V +L Y+KGT+
Sbjct: 373 VDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 431
Query: 61 LCFGGDT-CQVSGYVDSNYVGDLDRRQSTTGYVFRVHGALVSWRSMLQSTIA 111
L + Q+ + D+++ D R+ST GY + +L+SW+S Q ++
Sbjct: 432 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVS 483
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 43.1 bits (100), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 14 MYAIVCTRPDISHPVSVVNRFMANPGKTHWEVVKWVLRYLKGTIDTTLCFGGDT-CQVSG 72
MY + TRPD++ V+ +++F + + V VL Y+KGT+ L + + Q+
Sbjct: 1 MY-LTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 73 YVDSNYVGDLDRRQSTTGY 91
+ DS++ D R+S TG+
Sbjct: 60 FADSDWASCPDTRRSVTGF 78