BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1800.1
(115 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 72 4e-16
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 61 9e-12
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 61 9e-12
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 71.6 bits (174), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 26 IYLLLYVDDMLIASRSMVEIDKLKSQLSQEFEMKDMGAAKKILGIEIKRERSSKKLYLSQ 85
+YLLLYVDD+L+ S ++ L QLS F MKD+G LGI+IK S L+LSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 86 KGYIERVVSRFGMQNAKAMSTTLA 109
Y E++++ GM + K MST L
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLP 82
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 60.8 bits (146), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 1 MLKHGFRRSDYDCCIYIKKLRKGDFIYLLLYVDDMLIASRSMVEIDKLKSQLSQEFEMKD 60
++ GF +S D Y K+ F+ +L+YVDD++I S + +D+LKSQL F+++D
Sbjct: 254 LIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312
Query: 61 MGAAKKILGIEIKRERSSKKLYLSQKGYIERVVSRFGMQNAKAMSTTLAPHFRLS 115
+G K LG+EI RS+ + + Q+ Y ++ G+ K S + P S
Sbjct: 313 LGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFS 365
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 60.8 bits (146), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 1 MLKHGFRRSDYDCCIYIKKLRKGDFIYLLLYVDDMLIASRSMVEIDKLKSQLSQEFEMKD 60
++ GF +S D Y K+ F+ +L+YVDD++I S + +D+LKSQL F+++D
Sbjct: 254 LIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312
Query: 61 MGAAKKILGIEIKRERSSKKLYLSQKGYIERVVSRFGMQNAKAMSTTLAPHFRLS 115
+G K LG+EI RS+ + + Q+ Y ++ G+ K S + P S
Sbjct: 313 LGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFS 365