BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1810.1
(510 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 104 2e-23
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 104 2e-23
ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C... 82 4e-18
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 73/114 (64%), Gaps = 9/114 (7%)
Query: 400 VYKKKEDSSEIKGT--RYKARLVAKGYAHKEGVDYNEIFSPVVKRTFILLLLSNVAHSDL 457
VYK K +S GT RYKARLVAKGY +EG+D+ E FSPV K T + L+L+ A +
Sbjct: 132 VYKIKYNS---DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNF 188
Query: 458 ELEQLDVKTGFLHDDLEEEIYMAQPEGYKVEGKE----NQVCRLRKSLYGLKQS 507
L QLD+ FL+ DL+EEIYM P GY + N VC L+KS+YGLKQ+
Sbjct: 189 TLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQA 242
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 73/114 (64%), Gaps = 9/114 (7%)
Query: 400 VYKKKEDSSEIKGT--RYKARLVAKGYAHKEGVDYNEIFSPVVKRTFILLLLSNVAHSDL 457
VYK K +S GT RYKARLVAKGY +EG+D+ E FSPV K T + L+L+ A +
Sbjct: 132 VYKIKYNS---DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNF 188
Query: 458 ELEQLDVKTGFLHDDLEEEIYMAQPEGYKVEGKE----NQVCRLRKSLYGLKQS 507
L QLD+ FL+ DL+EEIYM P GY + N VC L+KS+YGLKQ+
Sbjct: 189 TLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQA 242
>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
ChrM:89617-90054 REVERSE LENGTH=145 | 201606
Length = 145
Score = 81.6 bits (200), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Query: 93 IKVVKGYLVAMRGTRYGNLYTLSGTIIMGDVAVGISGRDPTACTRLWHMRLGHMSEKGIS 152
+KV+KG ++G R+ +LY L G++ G+ + + +D T RLWH RL HMS++G+
Sbjct: 29 LKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAKDET---RLWHSRLAHMSQRGME 85
Query: 153 LMCGKGLLKDMKKPCMEFCEHCVFGKAHRA-FSSSKRRSK 191
L+ KG L K ++FCE C++GK HR FS+ + +K
Sbjct: 86 LLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTK 125