BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1870.1
(487 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G21740.1 | DUF630 family protein%2C putative (DUF630 and DUF6... 185 2e-50
AT1G77500.1 | DUF630 family protein%2C putative (DUF630 and DUF6... 175 3e-47
AT4G35240.4 | DNA-directed RNA polymerase subunit beta%2C putati... 72 7e-13
AT4G35240.3 | DNA-directed RNA polymerase subunit beta%2C putati... 72 7e-13
AT4G35240.2 | DNA-directed RNA polymerase subunit beta%2C putati... 72 7e-13
>AT1G21740.1 | DUF630 family protein%2C putative (DUF630 and DUF632)
| Chr1:7641580-7645078 FORWARD LENGTH=953 | 201606
Length = 953
Score = 185 bits (469), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 194/565 (34%), Positives = 270/565 (47%), Gaps = 101/565 (17%)
Query: 1 MGCGKSKIDDLPLVIRCRERKELIKAASDHRYALAASHLTYFTSLKQVGEALTRFVEEEL 60
MGCG SK+DD PLVI CRERK+LIKAAS HR ALAA+HL+YF SL VG+++ RFV+EEL
Sbjct: 1 MGCGGSKVDDQPLVILCRERKQLIKAASHHRCALAAAHLSYFQSLCDVGDSIKRFVDEEL 60
Query: 61 ITTG-DSNSFPSSPVLTLPSDQDK-------KKNGSTISSSSSTSFSHSLPLSH-HCSHD 111
+ G S+S P SPVLTLPSD+ K + S S H H S
Sbjct: 61 VLVGTSSSSSPDSPVLTLPSDEGKPHKHKISSSSTSVSHSVIEDDDEGEGEDQHLHLSSG 120
Query: 112 SDSDDDVDNEVNDDLGSDHLQSDLDSSNSISSDHQIPKNHIP--EIPEESEFLPEPESYY 169
S+ D ++ +D LG H+++ S + ++P+N+ P + +S + P +
Sbjct: 121 SELDSGSESGSDDSLGHIHIET---SPKVKEKETRLPENYQPGYQSGYQSGYQP---GFT 174
Query: 170 PYYYYSPSQS--------GMGF---------SSTTGINYSSYYMKKSTTKMASMIYEEPP 212
P Y Y P S G GF N Y+MKKS +++ +P
Sbjct: 175 PGYQYQPGYSAGYQYPVEGWGFMGENPNLNPYPNPNQNPGMYFMKKSVQPSRPVVF-QPE 233
Query: 213 LHSSKFYTNYSGNDRGGRGRGGGNFEVFPPMGNSQI--NPSPSPPPPPP----------P 260
H + +G G G N+ +P N+ P PP P P
Sbjct: 234 NHRVE-----NGQWLPENGVGYSNY--YPGNANTGYFGYPEQRREPPSPVRPTPAPPSPP 286
Query: 261 QVSGWDFFNPFDS----------IGTVYPNFYPMGRYGIGSTGTGSPDSVEVRKREGIP- 309
++S WDF N FD+ F+P G G + + SPDS EVR+REGIP
Sbjct: 287 RISSWDFLNVFDTYDYNRAGGGESSGAGAGFFPA--MGGGKSNSSSPDSREVREREGIPE 344
Query: 310 ---DLEDEIQHKPSEEAAAAAGRYKVK----QKNAVPDPRV--------GNSRAGP---- 350
+ E E+ + + G KVK Q+N + + ++ G SRA P
Sbjct: 345 LEEETEQEVIFGQTFKHMKRKGIEKVKEQHRQENEIHERKIKKRGDSGEGTSRAVPVVER 404
Query: 351 ---ASFGDGTY----RTTPTQNEEYVQSVE----EENMSSPDTIFVSESTG--KEEVVRK 397
+SFG T + +V E ++ +T+ ++S G +EE VRK
Sbjct: 405 ATESSFGSKTVSSFSSSEEESEFHHVNDGEGKSSSNDLGGHETV-ATKSVGEVEEEYVRK 463
Query: 398 KGVRFEVDMQSPPQGDDGSSIPVSLTTLSTHATRDIEQVVNEIRDEFNIASGYGKEVALM 457
KGV FE+D D SS SL+ LS HATRD+ +VV EI+ EF +AS +GKEVA++
Sbjct: 464 KGVSFELDENVTTSFDVESSKISSLSALSVHATRDLREVVKEIKSEFEVASSHGKEVAVL 523
Query: 458 LEVGKLRYRSTRTLLKGI-SSILSL 481
LEV KL Y+ + LK I S I+ L
Sbjct: 524 LEVSKLPYQQKSSGLKVIFSRIMYL 548
>AT1G77500.1 | DUF630 family protein%2C putative (DUF630 and DUF632)
| Chr1:29121753-29124937 FORWARD LENGTH=879 | 201606
Length = 879
Score = 175 bits (444), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 199/552 (36%), Positives = 258/552 (46%), Gaps = 119/552 (21%)
Query: 1 MGCGKSKIDDLPLVIRCRERKELIKAASDHRYALAASHLTYFTSLKQVGEALTRFVEEEL 60
MGCG SK+D+ P+VI CRERKEL+KAAS HR ALA +HLTYF SL VGEA+ RFV++E+
Sbjct: 1 MGCGGSKVDNQPIVILCRERKELLKAASYHRSALAVAHLTYFQSLSDVGEAIQRFVDDEV 60
Query: 61 ITTGDSNSFPSSPVLTLPSDQDKKKNGSTISSSSSTSFSHSLPLSHHCSHDSDSDDDVDN 120
+ S+S P SPVLTLPSD+ K IS SS+TS SHS+ ++
Sbjct: 61 VAGFSSSSSPDSPVLTLPSDEGKPTKHKRISPSSTTSISHSV---------------IEE 105
Query: 121 EVNDDLGSDHLQSDLDSSNSISSDHQIPKNHIPEIPEESEFLPEPESYYPYYY------- 173
E DD HL S +S + + S I PE +E P Y+P Y
Sbjct: 106 EDTDDDSHLHLSSGSESESEVGSKDHIQITSTPEQERSTESF--PSGYHPTNYAPPVYPP 163
Query: 174 -------------YSPSQSGMGFSSTTGI----NYSSYYMKKSTTKMASMIYEEPPLHSS 216
YS G+ + TG N YYMKKS + I+ +P H
Sbjct: 164 GYPPGYPFSYPTGYSSGNYQPGYPNYTGENPYGNRGMYYMKKSAPQSRPFIF-QPENHRV 222
Query: 217 KFYTNYSGNDRGGRGRGGGNFEVFPPMGNSQINPSPSPPPPPPPQVSGWDFFNPFDSIGT 276
+ + +D G R G Q PPP PP VS WDF N FD+
Sbjct: 223 EENAQWP-SDSGFRNTG------------VQRRSPSPLPPPSPPTVSTWDFLNVFDTYD- 268
Query: 277 VYPN-------FYPMGRYGIGSTGTGSPDSVEVRKREGIPDLED--------EIQHKPSE 321
Y N +YPMG I S SPDS EVR+REGIP+LE+ ++ +P
Sbjct: 269 -YSNARSRASGYYPMGMASISS----SPDSKEVREREGIPELEEVTEQEVIKQVYRRPKR 323
Query: 322 EAAAAAGRYKVKQKNAVPDPRVGNSRAGPASFGDGTYRTTPTQNEEYVQSVEEENMSS-- 379
++ + K+ V R N R P P Q E S++ E +SS
Sbjct: 324 PGLEKVKEHRDEHKHNVFPERNINKREVP----------MPEQVTE--SSLDSETISSFS 371
Query: 380 -----PDTIFVSESTGK--------------------EEVVRKKGVRFEV-DMQSPPQGD 413
+ +V+ GK E+ RKKGV FE+ + S D
Sbjct: 372 GSDVESEFHYVNGGEGKSSSISSISHGAGTKSSREVEEQYGRKKGVSFELEETTSTSSFD 431
Query: 414 DGSSIPVSLTTLSTHATRDIEQVVNEIRDEFNIASGYGKEVALMLEVGKLRYRSTRTLLK 473
SS SL++LS HATRD+ +VV EI+ EF IAS GKEVAL+LEVGKL Y+
Sbjct: 432 VESSKISSLSSLSIHATRDLREVVKEIKSEFEIASSCGKEVALLLEVGKLPYQHKNN--- 488
Query: 474 GISSILSLDLIL 485
G+ ILS + L
Sbjct: 489 GVKVILSRIMYL 500
>AT4G35240.4 | DNA-directed RNA polymerase subunit beta%2C
putative (DUF630 and DUF632) | Chr4:16761479-16764324
REVERSE LENGTH=846 | 201606
Length = 846
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MGCGKSKIDDLPLVIRCRERKELIKAASDHRYALAASHLTYFTSLKQVGEALTRFV--EE 58
MGC SK+DDLP V CRER ++AA RYALA SH+ Y SL+++G +L F+
Sbjct: 1 MGCTSSKLDDLPAVALCRERCAFLEAAIHQRYALAESHVAYTHSLREIGHSLHLFINHHH 60
Query: 59 ELITTGDSNSFPSSPVLTLP 78
+ +G +N SP L LP
Sbjct: 61 RFVASGGAN-VGDSPRLNLP 79
>AT4G35240.3 | DNA-directed RNA polymerase subunit beta%2C
putative (DUF630 and DUF632) | Chr4:16761479-16764324
REVERSE LENGTH=846 | 201606
Length = 846
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MGCGKSKIDDLPLVIRCRERKELIKAASDHRYALAASHLTYFTSLKQVGEALTRFV--EE 58
MGC SK+DDLP V CRER ++AA RYALA SH+ Y SL+++G +L F+
Sbjct: 1 MGCTSSKLDDLPAVALCRERCAFLEAAIHQRYALAESHVAYTHSLREIGHSLHLFINHHH 60
Query: 59 ELITTGDSNSFPSSPVLTLP 78
+ +G +N SP L LP
Sbjct: 61 RFVASGGAN-VGDSPRLNLP 79
>AT4G35240.2 | DNA-directed RNA polymerase subunit beta%2C
putative (DUF630 and DUF632) | Chr4:16761334-16764324
REVERSE LENGTH=865 | 201606
Length = 865
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MGCGKSKIDDLPLVIRCRERKELIKAASDHRYALAASHLTYFTSLKQVGEALTRFV--EE 58
MGC SK+DDLP V CRER ++AA RYALA SH+ Y SL+++G +L F+
Sbjct: 1 MGCTSSKLDDLPAVALCRERCAFLEAAIHQRYALAESHVAYTHSLREIGHSLHLFINHHH 60
Query: 59 ELITTGDSNSFPSSPVLTLP 78
+ +G +N SP L LP
Sbjct: 61 RFVASGGAN-VGDSPRLNLP 79