BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1900.1
(332 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 190 7e-54
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 190 7e-54
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 137 1e-38
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 190 bits (482), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 167/319 (52%), Gaps = 50/319 (15%)
Query: 40 LSSNHDSALFVKYSVAGRILLSLYVDDMIITGDDVDGIASLKLQLASQFEMKDLGTLRYF 99
+ S+ D F+K + + + +YVDD+II ++ + LK QL S F+++DLG L+YF
Sbjct: 260 VQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYF 319
Query: 100 LGIEVASTPQGYVLSQSKYTTTILERARISDTRTVDSPIESNARYSSMDGTPLADPTLYC 159
LG+E+A + G + Q KY +L+ + + P++ + +S+ G D Y
Sbjct: 320 LGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYR 379
Query: 160 TIVGSLVYLTITRHRICCAC----------------------------------YADWA- 184
++G L+YL ITR I A Y+ A
Sbjct: 380 RLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAE 439
Query: 185 -----------TDCTD-RKSIKGYCVFLGDSLISWRSKKQTVVSRSSTEAEYRAMASTTA 232
C D R+S GYC+FLG SLISW+SKKQ VVS+SS EAEYRA++ T
Sbjct: 440 MQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATD 499
Query: 233 EIVWLRELLADMGVSILEPTPMYCDNQSAIHIAHNSVFHERTKHIEIDCHFTRHH-FAQG 291
E++WL + ++ + + +PT ++CDN +AIHIA N+VFHERTKHIE DCH R Q
Sbjct: 500 EMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQA 559
Query: 292 TISLPFVSSTMQIVDLFTK 310
T+S F + Q D FT+
Sbjct: 560 TLSYSFQAYDEQ--DGFTE 576
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 190 bits (482), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 167/319 (52%), Gaps = 50/319 (15%)
Query: 40 LSSNHDSALFVKYSVAGRILLSLYVDDMIITGDDVDGIASLKLQLASQFEMKDLGTLRYF 99
+ S+ D F+K + + + +YVDD+II ++ + LK QL S F+++DLG L+YF
Sbjct: 260 VQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYF 319
Query: 100 LGIEVASTPQGYVLSQSKYTTTILERARISDTRTVDSPIESNARYSSMDGTPLADPTLYC 159
LG+E+A + G + Q KY +L+ + + P++ + +S+ G D Y
Sbjct: 320 LGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYR 379
Query: 160 TIVGSLVYLTITRHRICCAC----------------------------------YADWA- 184
++G L+YL ITR I A Y+ A
Sbjct: 380 RLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAE 439
Query: 185 -----------TDCTD-RKSIKGYCVFLGDSLISWRSKKQTVVSRSSTEAEYRAMASTTA 232
C D R+S GYC+FLG SLISW+SKKQ VVS+SS EAEYRA++ T
Sbjct: 440 MQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATD 499
Query: 233 EIVWLRELLADMGVSILEPTPMYCDNQSAIHIAHNSVFHERTKHIEIDCHFTRHH-FAQG 291
E++WL + ++ + + +PT ++CDN +AIHIA N+VFHERTKHIE DCH R Q
Sbjct: 500 EMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQA 559
Query: 292 TISLPFVSSTMQIVDLFTK 310
T+S F + Q D FT+
Sbjct: 560 TLSYSFQAYDEQ--DGFTE 576
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 137 bits (346), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 113/224 (50%), Gaps = 48/224 (21%)
Query: 60 LSLYVDDMIITGDDVDGIASLKLQLASQFEMKDLGTLRYFLGIEVASTPQGYVLSQSKYT 119
L LYVDD+++TG + L QL+S F MKDLG + YFLGI++ + P G LSQ+KY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 120 TTILERARISDTRTVDSPIESNARYSSMDGTPLADPTLYCTIVGSLVYLTITRHRICCA- 178
IL A + D + + +P+ SS+ DP+ + +IVG+L YLT+TR I A
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 121
Query: 179 ----------------------------------------------CYADWATDCTDRKS 192
C +DWA + R+S
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 181
Query: 193 IKGYCVFLGDSLISWRSKKQTVVSRSSTEAEYRAMASTTAEIVW 236
G+C FLG ++ISW +K+Q VSRSSTE EYRA+A T AE+ W
Sbjct: 182 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225