BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g2000.1
(142 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 53 8e-09
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 53 8e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 53.1 bits (126), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 37 YASAIGSIMYAMICTRPDVSCALSMCSRYQSNPVETHWTATKNFLKYSRRTKDHFVVYGG 96
Y IG +MY I TR D+S A++ S++ P H A L Y + T + Y
Sbjct: 378 YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 436
Query: 97 EETLKVVGHVDASFQRDRDDFRSQSAYVFCLNGGAVSWK 135
+ +++ DASFQ +D RS + Y L +SWK
Sbjct: 437 QAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWK 475
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 53.1 bits (126), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 37 YASAIGSIMYAMICTRPDVSCALSMCSRYQSNPVETHWTATKNFLKYSRRTKDHFVVYGG 96
Y IG +MY I TR D+S A++ S++ P H A L Y + T + Y
Sbjct: 378 YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 436
Query: 97 EETLKVVGHVDASFQRDRDDFRSQSAYVFCLNGGAVSWK 135
+ +++ DASFQ +D RS + Y L +SWK
Sbjct: 437 QAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWK 475