BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g2010.1
(104 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 85 2e-20
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 85 2e-20
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 85.1 bits (209), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
Query: 2 LKSIRIILAIATHYDYEIWKMDVKTAFLNGNLEEDVYMTQPEGFE----DSNNVGKVCKL 57
L S+++ILAI+ Y++ + ++D+ AFLNG+L+E++YM P G+ DS VC L
Sbjct: 173 LTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYL 232
Query: 58 KRSIYGLKQARRSWNIRFGEAIKEFCFLKNPEESCIYKKVSGS 100
K+SIYGLKQA R W ++F + F F+++ + + K++ +
Sbjct: 233 KKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITAT 275
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 85.1 bits (209), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
Query: 2 LKSIRIILAIATHYDYEIWKMDVKTAFLNGNLEEDVYMTQPEGFE----DSNNVGKVCKL 57
L S+++ILAI+ Y++ + ++D+ AFLNG+L+E++YM P G+ DS VC L
Sbjct: 173 LTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYL 232
Query: 58 KRSIYGLKQARRSWNIRFGEAIKEFCFLKNPEESCIYKKVSGS 100
K+SIYGLKQA R W ++F + F F+++ + + K++ +
Sbjct: 233 KKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITAT 275