BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g2210.1
(414 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 167 6e-45
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 167 6e-45
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 117 3e-30
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 67 1e-13
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 167 bits (423), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 127/206 (61%), Gaps = 1/206 (0%)
Query: 3 ACEPIDTPVEEGLKLFIEPNQIPVDKGRYQRLVGRLMYLAHTRPDLAYALSIVSQFMQNS 62
C+P P++ + VD Y+RL+GRLMYL TR D+++A++ +SQF +
Sbjct: 350 GCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAP 409
Query: 63 GEEHMNAVLRILRYLKAALGKGILFTKNSGCQTIDVYTDADWVGEVNGRRSTAGYFTFVG 122
H AV++IL Y+K +G+G+ ++ + Q + V++DA + + RRST GY F+G
Sbjct: 410 RLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQ-LQVFSDASFQSCKDTRRSTNGYCMFLG 468
Query: 123 GNLVTWRSKKQNVVARSSAESEFRGMADGICEALWLRLLLDDLGYPFERPIRLYCDNKAA 182
+L++W+SKKQ VV++SSAE+E+R ++ E +WL +L P +P L+CDN AA
Sbjct: 469 TSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAA 528
Query: 183 CDIAHNPVQHDRTKHVEVDRCFIKEK 208
IA N V H+RTKH+E D ++E+
Sbjct: 529 IHIATNAVFHERTKHIESDCHSVRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 167 bits (423), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 127/206 (61%), Gaps = 1/206 (0%)
Query: 3 ACEPIDTPVEEGLKLFIEPNQIPVDKGRYQRLVGRLMYLAHTRPDLAYALSIVSQFMQNS 62
C+P P++ + VD Y+RL+GRLMYL TR D+++A++ +SQF +
Sbjct: 350 GCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAP 409
Query: 63 GEEHMNAVLRILRYLKAALGKGILFTKNSGCQTIDVYTDADWVGEVNGRRSTAGYFTFVG 122
H AV++IL Y+K +G+G+ ++ + Q + V++DA + + RRST GY F+G
Sbjct: 410 RLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQ-LQVFSDASFQSCKDTRRSTNGYCMFLG 468
Query: 123 GNLVTWRSKKQNVVARSSAESEFRGMADGICEALWLRLLLDDLGYPFERPIRLYCDNKAA 182
+L++W+SKKQ VV++SSAE+E+R ++ E +WL +L P +P L+CDN AA
Sbjct: 469 TSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAA 528
Query: 183 CDIAHNPVQHDRTKHVEVDRCFIKEK 208
IA N V H+RTKH+E D ++E+
Sbjct: 529 IHIATNAVFHERTKHIESDCHSVRER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 117 bits (293), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 1 MSACEPIDTPVEEGLKLFIEPNQIPVDKGRYQRLVGRLMYLAHTRPDLAYALSIVSQFMQ 60
M C+P+ TP+ L + + P D ++ +VG L YL TRPD++YA++IV Q M
Sbjct: 71 MLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 129
Query: 61 NSGEEHMNAVLRILRYLKAALGKGILFTKNSGCQTIDVYTDADWVGEVNGRRSTAGYFTF 120
+ + R+LRY+K + G+ KNS + + D+DW G + RRST G+ TF
Sbjct: 130 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN-VQAFCDSDWAGCTSTRRSTTGFCTF 188
Query: 121 VGGNLVTWRSKKQNVVARSSAESEFRGMADGICEALW 157
+G N+++W +K+Q V+RSS E+E+R +A E W
Sbjct: 189 LGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 67.4 bits (163), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 39 MYLAHTRPDLAYALSIVSQFMQNSGEEHMNAVLRILRYLKAALGKGILFTKNSGCQTIDV 98
MYL TRPDL +A++ +SQF S M AV ++L Y+K +G+G+ ++ S Q +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQ-LKA 59
Query: 99 YTDADWVGEVNGRRSTAGYFTFV 121
+ D+DW + RRS G+ + V
Sbjct: 60 FADSDWASCPDTRRSVTGFCSLV 82