BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g2220.1
(807 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 187 7e-49
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 187 7e-49
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 73 6e-14
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 58 5e-10
ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C... 56 4e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 187 bits (475), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 180/350 (51%), Gaps = 60/350 (17%)
Query: 494 PNQSLVEDDPEAPSEPSRKILPPRQTRGIPKPTYEPE-----LSSKVKYPMSHYVSDHRL 548
P+ ++ D PE S R+TR KP Y + ++S + +S ++S ++
Sbjct: 18 PSANIQNDVPEPSVHTSH-----RRTR---KPAYLQDYYCHSVASLTIHDISQFLSYEKV 69
Query: 549 TESNKSFVNQLSTVSIPNNVQEALSDPKWKAAMNEEMKSLQKNDTWEV------------ 596
+ SF+ ++ P+ EA W AM++E+ +++ TWE+
Sbjct: 70 SPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGC 129
Query: 597 --------------------------------DYTETFALVAKINTVRVLLSLATNFDWP 624
D+ ETF+ V K+ +V+++L+++ +++
Sbjct: 130 KWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFT 189
Query: 625 LQQFDVKNAFLHGELLEEVYMDLPPGCNIPEKHN---QKVCRLKKLLYGLKQSPRAWFGR 681
L Q D+ NAFL+G+L EE+YM LPPG + + VC LKK +YGLKQ+ R WF +
Sbjct: 190 LHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLK 249
Query: 682 LTKAMKEFGYRQSNSDHTLFIKRHEGKLTAFIVYVDDMVVTGDDPEERKALQNYLSKEFE 741
+ + FG+ QS+SDHT F+K +VYVDD+++ ++ L++ L F+
Sbjct: 250 FSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFK 309
Query: 742 MKDLGELKYFLGIEVSRSNKGIYLSQRKYTLDLLHEVGMSACEPIDTPVE 791
++DLG LKYFLG+E++RS GI + QRKY LDLL E G+ C+P P++
Sbjct: 310 LRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMD 359
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 187 bits (475), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 180/350 (51%), Gaps = 60/350 (17%)
Query: 494 PNQSLVEDDPEAPSEPSRKILPPRQTRGIPKPTYEPE-----LSSKVKYPMSHYVSDHRL 548
P+ ++ D PE S R+TR KP Y + ++S + +S ++S ++
Sbjct: 18 PSANIQNDVPEPSVHTSH-----RRTR---KPAYLQDYYCHSVASLTIHDISQFLSYEKV 69
Query: 549 TESNKSFVNQLSTVSIPNNVQEALSDPKWKAAMNEEMKSLQKNDTWEV------------ 596
+ SF+ ++ P+ EA W AM++E+ +++ TWE+
Sbjct: 70 SPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGC 129
Query: 597 --------------------------------DYTETFALVAKINTVRVLLSLATNFDWP 624
D+ ETF+ V K+ +V+++L+++ +++
Sbjct: 130 KWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFT 189
Query: 625 LQQFDVKNAFLHGELLEEVYMDLPPGCNIPEKHN---QKVCRLKKLLYGLKQSPRAWFGR 681
L Q D+ NAFL+G+L EE+YM LPPG + + VC LKK +YGLKQ+ R WF +
Sbjct: 190 LHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLK 249
Query: 682 LTKAMKEFGYRQSNSDHTLFIKRHEGKLTAFIVYVDDMVVTGDDPEERKALQNYLSKEFE 741
+ + FG+ QS+SDHT F+K +VYVDD+++ ++ L++ L F+
Sbjct: 250 FSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFK 309
Query: 742 MKDLGELKYFLGIEVSRSNKGIYLSQRKYTLDLLHEVGMSACEPIDTPVE 791
++DLG LKYFLG+E++RS GI + QRKY LDLL E G+ C+P P++
Sbjct: 310 LRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMD 359
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 72.8 bits (177), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%)
Query: 712 FIVYVDDMVVTGDDPEERKALQNYLSKEFEMKDLGELKYFLGIEVSRSNKGIYLSQRKYT 771
++YVDD+++TG L LS F MKDLG + YFLGI++ G++LSQ KY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 772 LDLLHEVGMSACEPIDTPVEEGLKLFIEPNQIP 804
+L+ GM C+P+ TP+ L + + P
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP 95
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 58.2 bits (139), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 15/91 (16%)
Query: 288 NRHLLEVIRAMLIEAHMPLCFWGEALLAATYLIDRVPSSTIEFKTP----FQALADVITS 343
NR ++E +R+ML E +P F +A A ++I++ PS+ I F P FQ++
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSV------ 55
Query: 344 PTVSNLPPRIFGCVVFVHLHEHQRAKLTPRA 374
PT S L R FGCV ++H E KL PRA
Sbjct: 56 PTYSYL--RRFGCVAYIHCDE---GKLKPRA 81
>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
ChrM:89617-90054 REVERSE LENGTH=145 | 201606
Length = 145
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 110 VFKDIQTRQTIGYGVRRGKLYYLDLVSESCSKLRQALTMNNFEDKSKAKIWLWHRRLGHA 169
V K ++ +TI G R LY L E+ +N + +K + LWH RL H
Sbjct: 28 VLKVLKGCRTILKGNRHDSLYILQGSVETGE--------SNLAETAKDETRLWHSRLAHM 79
Query: 170 SFGYLKKLFPSLFINSD-VSSFQ-CDVCALAKSHRISFPLKLNKSPIPSLILHSDVWGPS 227
S ++ L F++S VSS + C+ C K+HR++F + + P +HSD+WG
Sbjct: 80 SQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAP 139
Query: 228 KVP 230
VP
Sbjct: 140 SVP 142