BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g2360.1
(287 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G44440.2 | FAD-binding Berberine family protein | Chr5:179106... 67 4e-12
AT5G44440.1 | FAD-binding Berberine family protein | Chr5:179106... 67 4e-12
AT1G30760.2 | FAD-binding Berberine family protein | Chr1:109182... 65 1e-11
AT1G30760.1 | FAD-binding Berberine family protein | Chr1:109183... 65 1e-11
AT5G44360.2 | FAD-binding Berberine family protein | Chr5:178721... 65 2e-11
>AT5G44440.2 | FAD-binding Berberine family protein |
Chr5:17910694-17912505 REVERSE LENGTH=603 | 201606
Length = 603
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 15/127 (11%)
Query: 163 WKVRLVLVPPTVTV-TINQYLEQGATRLVTKWHYMADKIDQNLGVTILAVKSTQQVSGK- 220
WKV+LV VP T+TV + + ++ A R++ KW Y ADK+ +L +++T + S K
Sbjct: 312 WKVKLVDVPSTITVFKVQKTSKKEAVRIIKKWQYAADKVPDDL-----FIRTTLERSNKN 366
Query: 221 IIQACFSRLCFGGVDKLLGLIEFIVHELGFTGKTTIKMSWIDSHVSF--------LSTLT 272
+ A F+ L G V+ LL L+E ELG + +MSWI+S + F L LT
Sbjct: 367 AVHALFTGLYIGPVNNLLALMEEKFPELGLEKEGCEEMSWIESVLWFADFPKGESLGVLT 426
Query: 273 NNDVVSV 279
N + S+
Sbjct: 427 NRERTSL 433
>AT5G44440.1 | FAD-binding Berberine family protein |
Chr5:17910694-17912295 REVERSE LENGTH=533 | 201606
Length = 533
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 15/127 (11%)
Query: 163 WKVRLVLVPPTVTV-TINQYLEQGATRLVTKWHYMADKIDQNLGVTILAVKSTQQVSGK- 220
WKV+LV VP T+TV + + ++ A R++ KW Y ADK+ +L +++T + S K
Sbjct: 242 WKVKLVDVPSTITVFKVQKTSKKEAVRIIKKWQYAADKVPDDL-----FIRTTLERSNKN 296
Query: 221 IIQACFSRLCFGGVDKLLGLIEFIVHELGFTGKTTIKMSWIDSHVSF--------LSTLT 272
+ A F+ L G V+ LL L+E ELG + +MSWI+S + F L LT
Sbjct: 297 AVHALFTGLYIGPVNNLLALMEEKFPELGLEKEGCEEMSWIESVLWFADFPKGESLGVLT 356
Query: 273 NNDVVSV 279
N + S+
Sbjct: 357 NRERTSL 363
>AT1G30760.2 | FAD-binding Berberine family protein |
Chr1:10918267-10920441 FORWARD LENGTH=552 | 201606
Length = 552
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 161 ILWKVRLVLVPPTVTV-TINQYLEQGATRLVTKWHYMADKIDQNL--GVTILAVKSTQQV 217
+ WK++LV VP VTV T+ + LEQ T+L+ KW +ADK+D++L V I T +
Sbjct: 265 LAWKIKLVPVPEIVTVFTVTRTLEQDGTKLLYKWQQVADKLDEDLFIRVIIQPTSKTPKS 324
Query: 218 SGKIIQACFSRLCFGGVDKLLGLIEFIVHELGFTGKTTIKMSWIDS 263
+ I + G ++LL +++ +LG T K ++ SWI S
Sbjct: 325 KERTISTSYQGQFLGDANRLLQVMQRSFPQLGLTKKDCLETSWIKS 370
>AT1G30760.1 | FAD-binding Berberine family protein |
Chr1:10918321-10920441 FORWARD LENGTH=534 | 201606
Length = 534
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 161 ILWKVRLVLVPPTVTV-TINQYLEQGATRLVTKWHYMADKIDQNL--GVTILAVKSTQQV 217
+ WK++LV VP VTV T+ + LEQ T+L+ KW +ADK+D++L V I T +
Sbjct: 247 LAWKIKLVPVPEIVTVFTVTRTLEQDGTKLLYKWQQVADKLDEDLFIRVIIQPTSKTPKS 306
Query: 218 SGKIIQACFSRLCFGGVDKLLGLIEFIVHELGFTGKTTIKMSWIDS 263
+ I + G ++LL +++ +LG T K ++ SWI S
Sbjct: 307 KERTISTSYQGQFLGDANRLLQVMQRSFPQLGLTKKDCLETSWIKS 352
>AT5G44360.2 | FAD-binding Berberine family protein |
Chr5:17872100-17873746 REVERSE LENGTH=548 | 201606
Length = 548
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 163 WKVRLVLVPPTVTV-TINQYLEQGATRLVTKWHYMADKIDQNLGVTILAVKSTQQVSGKI 221
WKV+LV VP VT N L Q T++V +W +A ++D NL + ++ +SG
Sbjct: 265 WKVKLVRVPEKVTCFRRNLPLTQNMTKIVHRWQQIAAELDDNLFIRVIV-----SISGGS 319
Query: 222 IQACFSRLCFGGVDKLLGLIEFIVHELGFTGKTTIKMSWIDSHVSF 267
+Q F GG+DKL+ L+ ELG T + +M+WIDS + F
Sbjct: 320 VQTTFQANYLGGIDKLIPLMNQKFPELGLTFQDCSEMTWIDSIMYF 365