BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g2380.1
(550 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G46090.1 | C2H2 and C2HC zinc fingers superfamily protein | C... 81 1e-17
AT1G49900.1 | C2H2 type zinc finger transcription factor family ... 84 2e-16
AT3G46080.1 | C2H2-type zinc finger family protein | Chr3:169227... 77 3e-16
AT3G19580.2 | zinc-finger protein 2 | Chr3:6803293-6804114 REVER... 75 6e-15
AT3G19580.1 | zinc-finger protein 2 | Chr3:6803293-6804114 REVER... 75 6e-15
>AT3G46090.1 | C2H2 and C2HC zinc fingers superfamily protein |
Chr3:16926304-16926810 REVERSE LENGTH=168 | 201606
Length = 168
Score = 80.9 bits (198), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 15/108 (13%)
Query: 323 FKCNICHKSFSSYQALGGHKSGHKNCKDHDESSLLNAVKNFNRVDELQELNVSMVKSSAT 382
F+C C K FSS+QALGGH++ HK + D SLL ++ N K + T
Sbjct: 40 FRCKTCLKEFSSFQALGGHRASHKKLINSDNPSLLGSLSN---------------KKTKT 84
Query: 383 IHQCKICNMSFSSGQALGGHQRRHRVSPLGATISSEVVLDEAQRRTSL 430
H C IC + F GQALGGH RRHR + ++ + L E T+L
Sbjct: 85 SHPCPICGVKFPMGQALGGHMRRHRNEKVSGSLVTRSFLPETTTVTAL 132
>AT1G49900.1 | C2H2 type zinc finger transcription factor family |
Chr1:18474108-18477643 REVERSE LENGTH=917 | 201606
Length = 917
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
Query: 314 ETPPVISNEFKCNICHKSFSSYQALGGHKSGHKNCKDHDESSLLNAVKNFNRVDELQELN 373
+T P S+ FKC+IC K F+SYQALGGHK+ H S+ A D ++
Sbjct: 184 QTAPPKSDLFKCSICEKVFTSYQALGGHKASH---------SIKAAQLENAGADAGEKTR 234
Query: 374 VSMVKSSATIHQCKICNMSFSSGQALGGHQRRHRVSPLGA 413
M+ S IH+C IC++ F +GQALGGH+RRH LG
Sbjct: 235 SKMLSPSGKIHKCDICHVLFPTGQALGGHKRRHYEGLLGG 274
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 13/87 (14%)
Query: 320 SNEFKCNICHKSFSSYQALGGHKSGHKNCKDHDESSLLNAVKNFNRVDELQELNVSMVKS 379
S+ ++CN+C + SYQALGGHK+ H+ + + NA +++ +
Sbjct: 747 SDSYQCNVCGRELPSYQALGGHKASHRT-----KPPVENATG--------EKMRPKKLAP 793
Query: 380 SATIHQCKICNMSFSSGQALGGHQRRH 406
S IH+C IC+ FS+GQ+LGGH+R H
Sbjct: 794 SGKIHKCSICHREFSTGQSLGGHKRLH 820
>AT3G46080.1 | C2H2-type zinc finger family protein |
Chr3:16922753-16923247 REVERSE LENGTH=164 | 201606
Length = 164
Score = 77.0 bits (188), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 57/111 (51%), Gaps = 18/111 (16%)
Query: 323 FKCNICHKSFSSYQALGGHKSGHKNCKDHDESSLLNAVKNFNRVDELQELNVSMVKSSAT 382
F+C C K FSS+QALGGH++ HK + + SLL ++ N +AT
Sbjct: 37 FRCKTCLKEFSSFQALGGHRASHKKLINSSDPSLLGSLSNKK-------------TKTAT 83
Query: 383 IHQCKICNMSFSSGQALGGHQRRHR---VSPLGATISSEVVLDEAQRRTSL 430
H C IC + F GQALGGH RRHR SP T+ + L E T+L
Sbjct: 84 SHPCPICGVEFPMGQALGGHMRRHRSEKASP--GTLVTRSFLPETTTVTTL 132
>AT3G19580.2 | zinc-finger protein 2 | Chr3:6803293-6804114 REVERSE
LENGTH=273 | 201606
Length = 273
Score = 75.5 bits (184), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 19/110 (17%)
Query: 307 RFHGNGKE-TPPVISN--EFKCNICHKSFSSYQALGGHKSGHKNCKDHDESSLLNAVKNF 363
RFH + TPP S +KCN+C K+F SYQALGGHK+ H+ +
Sbjct: 87 RFHQQSQSLTPPPESKNLPYKCNVCEKAFPSYQALGGHKASHR---------IKPPTVIS 137
Query: 364 NRVDELQELNVSMV-------KSSATIHQCKICNMSFSSGQALGGHQRRH 406
D+ +S+V +S IH+C IC+ F +GQALGGH+R H
Sbjct: 138 TTADDSTAPTISIVAGEKHPIAASGKIHECSICHKVFPTGQALGGHKRCH 187
>AT3G19580.1 | zinc-finger protein 2 | Chr3:6803293-6804114 REVERSE
LENGTH=273 | 201606
Length = 273
Score = 75.5 bits (184), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 19/110 (17%)
Query: 307 RFHGNGKE-TPPVISN--EFKCNICHKSFSSYQALGGHKSGHKNCKDHDESSLLNAVKNF 363
RFH + TPP S +KCN+C K+F SYQALGGHK+ H+ +
Sbjct: 87 RFHQQSQSLTPPPESKNLPYKCNVCEKAFPSYQALGGHKASHR---------IKPPTVIS 137
Query: 364 NRVDELQELNVSMV-------KSSATIHQCKICNMSFSSGQALGGHQRRH 406
D+ +S+V +S IH+C IC+ F +GQALGGH+R H
Sbjct: 138 TTADDSTAPTISIVAGEKHPIAASGKIHECSICHKVFPTGQALGGHKRCH 187