BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000040.1_g0030.1
         (107 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G25270.1 | Ribonuclease H-like superfamily protein | Chr3:920...    44   5e-06
AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143...    44   6e-06

>AT3G25270.1 | Ribonuclease H-like superfamily protein |
           Chr3:9203934-9204965 REVERSE LENGTH=343 | 201606
          Length = 343

 Score = 43.9 bits (102), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 1/91 (1%)

Query: 13  KWQPPPQNFIKVNVDASFTNITSNVGISLIVHNAESKFIGAKVKF-TRARNSEEGEATAI 71
           KWQ PP  +IK N D +F + T N     ++ +    ++G+     +   +S E E  A+
Sbjct: 185 KWQRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDSLESEFQAL 244

Query: 72  LLGLEWAKANQLKNIIVECDNINLIKHLDNQ 102
           ++ ++ A +   + +I E D+  + + ++N+
Sbjct: 245 IIAMQHAWSQGYRKVIFEGDSKQVEELMNNE 275


>AT4G29090.1 | Ribonuclease H-like superfamily protein |
           Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
          Length = 575

 Score = 43.9 bits (102), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 5   KIKHTPSEKWQPPPQNFIKVNVDASFTNITSNVGISLIVHN--AESKFIGAKVKFTRARN 62
           ++  +   +W+PPP  ++K N DA++       GI  ++ N   E K++GA+    + ++
Sbjct: 411 QVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARA-LPKLKS 469

Query: 63  SEEGEATAILLGLEWAKANQLKNIIVECDNINLIKHLDN 101
             E E  A+   +      Q   +I E D+  LI+ L+N
Sbjct: 470 VLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNN 508

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