BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000042.1_g0040.1
(248 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 87 3e-19
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 87 3e-19
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 50 3e-07
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 87.0 bits (214), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 114/231 (49%), Gaps = 15/231 (6%)
Query: 20 MYLLDVVTAYLYDILDIDIYMKVPEGFKLPEGK---PHVMYSLKLNRALYGLKKSMRMWY 76
++ LD+ A+L LD +IYMK+P G+ +G P+ + LK +++YGLK++ R W+
Sbjct: 190 LHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLK--KSIYGLKQASRQWF 247
Query: 77 NRLSEYLAKARFVNDPICPCVFIKKSYTEFDITAIYVDNINLIEIVE-DVSKAAEYLKKE 135
+ S L FV F+K + T F +YVD+I + + V + LK
Sbjct: 248 LKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSC 307
Query: 136 FEMKDSGKTKFYIGLQIERSTSGILVHQNLYIEKVVKRFRMGAAYSLSTPIVVRYLDTVK 195
F+++D G K+++GL+I RS +GI + Q Y ++ + S P+ +V
Sbjct: 308 FKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMD----PSVT 363
Query: 196 DQFRLKEDNVALRGPEVPYLSAIIALLYLAQGTRPDIFFPVNLLPRFSSAP 246
D V + Y I L+YL Q TR DI F VN L +FS AP
Sbjct: 364 FSAHSGGDFVDAKA----YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAP 409
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 87.0 bits (214), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 114/231 (49%), Gaps = 15/231 (6%)
Query: 20 MYLLDVVTAYLYDILDIDIYMKVPEGFKLPEGK---PHVMYSLKLNRALYGLKKSMRMWY 76
++ LD+ A+L LD +IYMK+P G+ +G P+ + LK +++YGLK++ R W+
Sbjct: 190 LHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLK--KSIYGLKQASRQWF 247
Query: 77 NRLSEYLAKARFVNDPICPCVFIKKSYTEFDITAIYVDNINLIEIVE-DVSKAAEYLKKE 135
+ S L FV F+K + T F +YVD+I + + V + LK
Sbjct: 248 LKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSC 307
Query: 136 FEMKDSGKTKFYIGLQIERSTSGILVHQNLYIEKVVKRFRMGAAYSLSTPIVVRYLDTVK 195
F+++D G K+++GL+I RS +GI + Q Y ++ + S P+ +V
Sbjct: 308 FKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMD----PSVT 363
Query: 196 DQFRLKEDNVALRGPEVPYLSAIIALLYLAQGTRPDIFFPVNLLPRFSSAP 246
D V + Y I L+YL Q TR DI F VN L +FS AP
Sbjct: 364 FSAHSGGDFVDAKA----YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAP 409
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 132 LKKEFEMKDSGKTKFYIGLQIERSTSGILVHQNLYIEKVVKRFRMGAAYSLSTPIVVRYL 191
L F MKD G +++G+QI+ SG+ + Q Y E+++ M +STP+ ++
Sbjct: 27 LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN 86
Query: 192 DTVKDQFRLKEDNVALRGPEVPYLSAIIALLYLAQGTRPDIFFPVNLLPRFSSAPT 247
+V + P+ +I+ L TRPDI + VN++ + PT
Sbjct: 87 SSVS----------TAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPT 132