BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000042.1_g0060.1
(142 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 52 8e-09
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 49 3e-07
AT4G09490.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 46 1e-06
>AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr3:8344629-8345204 FORWARD
LENGTH=191 | 201606
Length = 191
Score = 52.4 bits (124), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 2 EPPTTPYIKINVDASFKSLTELAGISCIMYDAQANFIATLPDTTRG-QNLEECECIAIMC 60
+ P ++K N D S + + +G+ I+ ++Q + +G Q ++E EC A++
Sbjct: 31 QKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQGTCLDCGCGKFQGRQTIKEAECTALIW 90
Query: 61 AIKWAIDLQIKHLHIESDNINVIKHLHDPSRSIQWQSGKHLKEIHNLKAQFTSIIFSYIP 120
AI+ A DL + + E DNI V + + + + + + +L+ I FT++ F++
Sbjct: 91 AIQCAWDLGYRRVEFEGDNITVNRLIRNKETNPRLRY--YLEFIQQWSKAFTTVKFTFRH 148
Query: 121 RNNNKHANSLAK 132
R N + LAK
Sbjct: 149 REQNVCVDVLAK 160
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 48.5 bits (114), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 3/131 (2%)
Query: 3 PPTTPYIKINVDASFKSLTELAGISCIMYDAQANFIATLPDTTRGQ-NLEECECIAIMCA 61
PP +K N DAS ++G+ I+ ++Q I +G+ EE EC ++ A
Sbjct: 107 PPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLIWA 166
Query: 62 IKWAIDLQIKHLHIESDNINVIKHLHDPSRSIQWQSGKHLKEIHNLKAQFTSIIFSYIPR 121
I+ + K + E DN + + ++ S + + Q L I + F SI FS+ R
Sbjct: 167 IQASYGFGHKKVIFEGDNQTITRMINTKSSNPRLQ--HFLDTIQSWIPSFESIEFSFKHR 224
Query: 122 NNNKHANSLAK 132
N A+ LAK
Sbjct: 225 EQNGCADFLAK 235
>AT4G09490.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr4:6015583-6016575 REVERSE
LENGTH=170 | 201606
Length = 170
Score = 46.2 bits (108), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 53 CECIAIMCAIKWAIDLQIKHLHIESDNINVIKHLHDPSRSIQWQSGKHLKEIHNLKAQFT 112
E IA+ A+++A + I L + SD+ +I + S S ++ + +I NL F
Sbjct: 76 AEAIALFLALQYAQSIGITKLSMASDSQQLITAITSESPSTEFYG--IIFDILNLSLGFA 133
Query: 113 SIIFSYIPRNNNKHANSLAK 132
+ FS++PR+ N+ A+ LAK
Sbjct: 134 DVSFSFVPRSENRVADELAK 153