BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000042.1_g0080.1
(386 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08460.1 | histone deacetylase 8 | Chr1:2672527-2674469 FORWA... 549 0.0
AT1G08460.2 | histone deacetylase 8 | Chr1:2672527-2673651 FORWA... 430 e-151
AT5G61060.2 | histone deacetylase 5 | Chr5:24567137-24570917 REV... 164 1e-44
AT5G61060.1 | histone deacetylase 5 | Chr5:24567137-24570917 REV... 162 4e-44
AT4G33470.1 | histone deacetylase 14 | Chr4:16102774-16105439 RE... 155 7e-43
>AT1G08460.1 | histone deacetylase 8 | Chr1:2672527-2674469 FORWARD
LENGTH=377 | 201606
Length = 377
Score = 549 bits (1415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 256/364 (70%), Positives = 310/364 (85%), Gaps = 2/364 (0%)
Query: 10 TQLIHVFWHEGMLNHDTGTGVFDTLMDPGFLEILEKHPENSDRVKNMVSILKKGPISPYI 69
T + VFWHEGML HD GVFDT DPGFL++LEKHPEN+DRV+NM+SIL++GPI+P++
Sbjct: 3 TNRVDVFWHEGMLRHDAVEGVFDTGYDPGFLDVLEKHPENADRVRNMLSILRRGPIAPHV 62
Query: 70 SWHSGRLALIPELLSFHTPEYINELIEADKAGGK-KLCAGTILNPGSWDASLLAAGTTLK 128
+W +G A++ ELL FHT EYI +L+EADK+G + ++ AGT ++PGSW+A+LLAAGTTL
Sbjct: 63 NWFTGLPAIVSELLMFHTSEYIEKLVEADKSGERCEIAAGTFMSPGSWEAALLAAGTTLS 122
Query: 129 AMKHILDGNGKIAYALVRPPGHHAQPTRADGYCFLNNAGLAINLALDSG-CERVVVIDID 187
AM+HILD +GKIAYALVRPPGHH+QPT+ADGYCFLNNA LA+ LAL+SG C RV VIDID
Sbjct: 123 AMQHILDCHGKIAYALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDID 182
Query: 188 VHYGNGTAEGYYRSDNVLTISLHMNHGSWGSSHPQDGSIDELGEGRGLGFNLNIPLPNGT 247
VHYGNGTAEG+Y SD VLT+SLHMNHGSWGSSHPQ GSIDELGE GLG+NLN+PLPNGT
Sbjct: 183 VHYGNGTAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLPNGT 242
Query: 248 GDRGYMYAMNELVAPAVEKFEPSMMVLVVGQDSSAFDPNGRQCLTMEGYREIGRVVRRLA 307
GDRGY YAMNELV PAV +F P M+VLVVGQDSSAFDPNGRQ LTM GYR IG+++R +A
Sbjct: 243 GDRGYEYAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMRGVA 302
Query: 308 DKYSKGRILIVQEGGYHITYSAYCLHATLEGILGLHVSLLSDPVAYYPEDETLTIKVVDS 367
+++S GR+L+VQEGGYH+TY+AYCLHA LEG+L + LSDP+AYYPE+E + V+S
Sbjct: 303 EEHSHGRLLMVQEGGYHVTYAAYCLHAMLEGVLKIPEPHLSDPIAYYPEEEANAVAAVES 362
Query: 368 IKEY 371
IK Y
Sbjct: 363 IKTY 366
>AT1G08460.2 | histone deacetylase 8 | Chr1:2672527-2673651 FORWARD
LENGTH=324 | 201606
Length = 324
Score = 430 bits (1105), Expect = e-151, Method: Compositional matrix adjust.
Identities = 201/275 (73%), Positives = 238/275 (86%), Gaps = 2/275 (0%)
Query: 10 TQLIHVFWHEGMLNHDTGTGVFDTLMDPGFLEILEKHPENSDRVKNMVSILKKGPISPYI 69
T + VFWHEGML HD GVFDT DPGFL++LEKHPEN+DRV+NM+SIL++GPI+P++
Sbjct: 3 TNRVDVFWHEGMLRHDAVEGVFDTGYDPGFLDVLEKHPENADRVRNMLSILRRGPIAPHV 62
Query: 70 SWHSGRLALIPELLSFHTPEYINELIEADKAGGK-KLCAGTILNPGSWDASLLAAGTTLK 128
+W +G A++ ELL FHT EYI +L+EADK+G + ++ AGT ++PGSW+A+LLAAGTTL
Sbjct: 63 NWFTGLPAIVSELLMFHTSEYIEKLVEADKSGERCEIAAGTFMSPGSWEAALLAAGTTLS 122
Query: 129 AMKHILDGNGKIAYALVRPPGHHAQPTRADGYCFLNNAGLAINLALDSG-CERVVVIDID 187
AM+HILD +GKIAYALVRPPGHH+QPT+ADGYCFLNNA LA+ LAL+SG C RV VIDID
Sbjct: 123 AMQHILDCHGKIAYALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDID 182
Query: 188 VHYGNGTAEGYYRSDNVLTISLHMNHGSWGSSHPQDGSIDELGEGRGLGFNLNIPLPNGT 247
VHYGNGTAEG+Y SD VLT+SLHMNHGSWGSSHPQ GSIDELGE GLG+NLN+PLPNGT
Sbjct: 183 VHYGNGTAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLPNGT 242
Query: 248 GDRGYMYAMNELVAPAVEKFEPSMMVLVVGQDSSA 282
GDRGY YAMNELV PAV +F P M+VLVVGQDSSA
Sbjct: 243 GDRGYEYAMNELVVPAVRRFGPDMVVLVVGQDSSA 277
>AT5G61060.2 | histone deacetylase 5 | Chr5:24567137-24570917
REVERSE LENGTH=664 | 201606
Length = 664
Score = 164 bits (414), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 195/394 (49%), Gaps = 40/394 (10%)
Query: 2 DSSSSSSPTQLIHVFWHEGMLNHDTGTGVFDTLMDPGFLEILEKHPENSDRVKNMVSILK 61
D + + + + + + E M HDT G E HPE DR++ + L+
Sbjct: 16 DGKVAGNRQRKVGLIYDETMCKHDTPDG--------------EDHPECPDRIRVIWEKLQ 61
Query: 62 KGPISPYISWHSGRLALIPELLSFHTPEYINELIEADKAGGKKLCAGTI--------LNP 113
+S A L HT +++N L+++ K I LN
Sbjct: 62 LAGVSQRCVVLGSSKAEDKHLQLVHTKDHVN-LVKSISTKQKDYRRNRIASQLNSIYLNG 120
Query: 114 GSWDASLLAAGTTLKAMKHILDGNGKIAYALVRPPGHHAQPTRADGYCFLNNAGLAINLA 173
GS +A+ LAAG+ +K + + +G +A+VRPPGHHA+ A G+C NN +A +
Sbjct: 121 GSSEAAYLAAGSVVKLAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFL 180
Query: 174 L----DSGCERVVVIDIDVHYGNGTAEGYYRSDNVLTISLHMNHGSWGSSHP--QDGSID 227
L D G ++++++D DVH+GNGT + +++ VL S+H + +G +P DG +
Sbjct: 181 LNERPDLGVKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHE--YGGFYPAGDDGDYN 238
Query: 228 ELGEGRGLGFNLNIPLPNG-TGDRGYMYAMNELVAPAVEKFEPSMMVLVVGQDSSAFDPN 286
+GEG G GFN+N+P G GD Y+ A + ++ P +F P ++ L G D++ DP
Sbjct: 239 MVGEGPGEGFNINVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPL 298
Query: 287 GRQCLTMEGYREIGRVVRRLADKYSKGRILIVQEGGYHITYSAYCLHATLEGILGLHVSL 346
G C+T GY + + V ++++G+I++ EGGY++ A A ++ + L
Sbjct: 299 GGCCVTPYGYSVMLKKVGVELMEFAQGKIVLALEGGYNLDSIAKSSLACVQVL--LEDKQ 356
Query: 347 LSDPVAYYPEDETLTIKVVDSIKE----YWKSSA 376
+ P YP + T +V+ ++++ YW S A
Sbjct: 357 IQGPPEAYPFESTW--RVIQAVRKRLCTYWPSLA 388
>AT5G61060.1 | histone deacetylase 5 | Chr5:24567137-24570917
REVERSE LENGTH=660 | 201606
Length = 660
Score = 162 bits (410), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 195/394 (49%), Gaps = 44/394 (11%)
Query: 2 DSSSSSSPTQLIHVFWHEGMLNHDTGTGVFDTLMDPGFLEILEKHPENSDRVKNMVSILK 61
D + + + + + + E M HDT G E HPE DR++ + L+
Sbjct: 16 DGKVAGNRQRKVGLIYDETMCKHDTPDG--------------EDHPECPDRIRVIWEKLQ 61
Query: 62 KGPISPYISWHSGRLALIPELLSFHTPEYINELIEADKAGGKKLCAGTI--------LNP 113
+S A L HT +++N L+++ K I LN
Sbjct: 62 LAGVSQRCVVLGSSKAEDKHLQLVHTKDHVN-LVKSISTKQKDYRRNRIASQLNSIYLNG 120
Query: 114 GSWDASLLAAGTTLKAMKHILDGNGKIAYALVRPPGHHAQPTRADGYCFLNNAGLAINLA 173
GS +A+ LAAG+ +K + + +G +A+VRPPGHHA+ A G+C NN +A +
Sbjct: 121 GSSEAAYLAAGSVVKLAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFL 180
Query: 174 L----DSGCERVVVIDIDVHYGNGTAEGYYRSDNVLTISLHMNHGSWGSSHP--QDGSID 227
L D G ++++++D DVH+GNGT + +++ VL S+H + +G +P DG +
Sbjct: 181 LNERPDLGVKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHE--YGGFYPAGDDGDYN 238
Query: 228 ELGEGRGLGFNLNIPLPNG-TGDRGYMYAMNELVAPAVEKFEPSMMVLVVGQDSSAFDPN 286
+GEG G GFN+N+P G GD Y+ A + ++ P +F P ++ L G D++ DP
Sbjct: 239 MVGEGPGEGFNINVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPL 298
Query: 287 GRQCLTMEGYREIGRVVRRLADKYSKGRILIVQEGGYHITYSAYCLHATLEGILGLHVSL 346
G C+T GY V+ + ++++G+I++ EGGY++ A A ++ + L
Sbjct: 299 GGCCVTPYGY----SVMLKKLMEFAQGKIVLALEGGYNLDSIAKSSLACVQVL--LEDKQ 352
Query: 347 LSDPVAYYPEDETLTIKVVDSIKE----YWKSSA 376
+ P YP + T +V+ ++++ YW S A
Sbjct: 353 IQGPPEAYPFESTW--RVIQAVRKRLCTYWPSLA 384
>AT4G33470.1 | histone deacetylase 14 | Chr4:16102774-16105439
REVERSE LENGTH=423 | 201606
Length = 423
Score = 155 bits (391), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 170/347 (48%), Gaps = 28/347 (8%)
Query: 44 EKHPENSDRVKNMVSILKKGPISP------YISWHSGRLALIPELLSFHTPEYINELIEA 97
E HPE S RV +V+ L+ ++P + + + A + ++ + H Y+ L +A
Sbjct: 78 ESHPECSARVPAIVNALEMNELTPKFRGSQILELANFKTATVEDIANVHDKAYVFGLEKA 137
Query: 98 -DKAGGKKL-----CAGTILNPGSWDASLLAAGTTLKAMKHILDGNGK-----IAYALVR 146
D+A L T ++ SL+AAG + + ++ + I +AL+R
Sbjct: 138 MDEASDSGLIFIEGSGPTYATSTTFQDSLIAAGAGMALVDSVIAASRNSVDPPIGFALIR 197
Query: 147 PPGHHAQPTRADGYCFLNNAGLAINLALDS-GCERVVVIDIDVHYGNGTAEGYYRSDNVL 205
PPGHHA P G+C N +A A + G +R+ +ID DVH+GNGT + + ++
Sbjct: 198 PPGHHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIF 257
Query: 206 TISLHMNHGSWGSSHPQDGSIDELGEGRGLGFNLNIPLPNGTGDRGYMYAMNELVAPAVE 265
+S H + S+P G I ++G+G+G G LN+PLP G+GD E++ P +
Sbjct: 258 FLSTHQD-----GSYPGTGKISDIGKGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQ 312
Query: 266 KFEPSMMVLVVGQDSSAFDPNGRQCLTMEGYREIGRVVRRLADKYSKGRILIVQEGGYHI 325
+F+P ++++ G D+ DP T Y + + ++RLA + GR + EGGY++
Sbjct: 313 RFKPDIILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKRLAKEVCGGRCVFFLEGGYNL 372
Query: 326 TYSAYCLHATLEGILGLH--VSLLSDPVAYYPEDETLTIKVVDSIKE 370
+ + + +LG S +P Y DE + KV D+I+
Sbjct: 373 ESLSSSVADSFRALLGEDSLASEFDNPAYLY--DEPMR-KVRDAIQR 416