BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000042.1_g0180.1
(129 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G06500.1 | hAT family dimerization domain-containing protein ... 109 1e-28
AT1G35150.1 | General transcription factor 2-related zinc finger... 107 3e-28
AT4G10200.2 | TTF-type zinc finger protein with HAT dimerization... 86 2e-20
AT4G10200.1 | TTF-type zinc finger protein with HAT dimerization... 86 2e-20
AT5G35475.1 | General transcription factor 2-related zinc finger... 55 4e-10
>AT2G06500.1 | hAT family dimerization domain-containing protein |
Chr2:2580718-2583223 REVERSE LENGTH=582 | 201606
Length = 582
Score = 109 bits (273), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 73/114 (64%), Gaps = 4/114 (3%)
Query: 16 YGDWRHPSERLKEHELSSDHIANMATWIGLHLRFQKKHSIDQPQNKHSIDSIQKEKDHWR 75
Y DWR+ S+RL+EHE S DHI M W L R Q K +ID K+ I KEK HWR
Sbjct: 85 YNDWRNLSKRLEEHEGSHDHIICMTRWTELESRLQNKTTID----KYVQQEINKEKIHWR 140
Query: 76 LLLQSLISIVKYLLKYNLAIHGTNHKIAQECNGNFVGLVEMLAEHDPLMKEHLR 129
+L +I++VK L K NLA G N KI ++ NGNF+ +EM+AE D +M+EH+R
Sbjct: 141 EVLVRIIALVKTLAKNNLAFRGENKKIGEDRNGNFLSFIEMIAEFDVVMREHIR 194
>AT1G35150.1 | General transcription factor 2-related zinc finger
protein | Chr1:12864158-12866238 REVERSE LENGTH=459 |
201606
Length = 459
Score = 107 bits (268), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 76/119 (63%), Gaps = 4/119 (3%)
Query: 11 LANDGYGDWRHPSERLKEHELSSDHIANMATWIGLHLRFQKKHSIDQPQNKHSIDSIQKE 70
LA GY DWR+ S+RLKEH+ S DHI M L R QK +ID KH+ ++I K+
Sbjct: 97 LATSGYNDWRNLSKRLKEHKGSHDHITCMTRRAELESRLQKNKTID----KHAQEAINKD 152
Query: 71 KDHWRLLLQSLISIVKYLLKYNLAIHGTNHKIAQECNGNFVGLVEMLAEHDPLMKEHLR 129
HWR +L +I++VK K NLA G N K+ Q+ NGNF+ +EM+AE D +M+EH+R
Sbjct: 153 NIHWREVLLRIIALVKTHAKNNLAFRGKNEKVGQDRNGNFLSFIEMIAEFDVVMREHIR 211
>AT4G10200.2 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr4:6353172-6355591 FORWARD
LENGTH=733 | 201606
Length = 733
Score = 86.3 bits (212), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 1 LFKKKLSENQLANDGYGDWRHPSERLKEHELSSDHIANMATWIGLHLRFQKKHSIDQPQN 60
LF + QL++ G+ DWR+ RL +HE S HI M+ W+ L LR +K +ID+
Sbjct: 140 LFGRDQDAMQLSSTGFNDWRNIRIRLSQHETSHRHIVCMSKWMELELRLRKHLTIDKCLQ 199
Query: 61 KHSIDSIQKEKDHWRLLLQSLISIVKYLLKYNLAIHGTNHKIAQECNGNF 110
K I EK+HWR +L + S+VK L K NLA G N KI Q+ NGNF
Sbjct: 200 K----DINIEKNHWREVLLRIFSLVKNLAKQNLAFRGENEKIGQKNNGNF 245
>AT4G10200.1 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr4:6353172-6355591 FORWARD
LENGTH=733 | 201606
Length = 733
Score = 86.3 bits (212), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 1 LFKKKLSENQLANDGYGDWRHPSERLKEHELSSDHIANMATWIGLHLRFQKKHSIDQPQN 60
LF + QL++ G+ DWR+ RL +HE S HI M+ W+ L LR +K +ID+
Sbjct: 140 LFGRDQDAMQLSSTGFNDWRNIRIRLSQHETSHRHIVCMSKWMELELRLRKHLTIDKCLQ 199
Query: 61 KHSIDSIQKEKDHWRLLLQSLISIVKYLLKYNLAIHGTNHKIAQECNGNF 110
K I EK+HWR +L + S+VK L K NLA G N KI Q+ NGNF
Sbjct: 200 K----DINIEKNHWREVLLRIFSLVKNLAKQNLAFRGENEKIGQKNNGNF 245
>AT5G35475.1 | General transcription factor 2-related zinc finger
protein | Chr5:13686252-13687326 REVERSE LENGTH=161 |
201606
Length = 161
Score = 55.1 bits (131), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 84 IVKYLLKYNLAIHGTNHKIAQECNGNFVGLVEMLAEHDPLMKEHLR 129
+VK L + NLA G++ KI ++ NGNF+ +E+LA+ DP+M EHLR
Sbjct: 3 VVKTLARQNLAFCGSSGKIGEDGNGNFLSFIEILADFDPVMIEHLR 48