BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000042.1_g0330.1
(232 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 142 2e-38
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 142 2e-38
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 77 1e-16
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 142 bits (357), Expect = 2e-38, Method: Composition-based stats.
Identities = 85/253 (33%), Positives = 140/253 (55%), Gaps = 28/253 (11%)
Query: 3 ALYDMELEQLDVKTAFLHGELEEQIYMRQPEGFEILGKE----DHVCLLKKSLYGLKQSH 58
A+Y+ L QLD+ AFL+G+L+E+IYM+ P G+ + + VC LKKS+YGLKQ+
Sbjct: 184 AIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQAS 243
Query: 59 RQWYKRFDTFMVKNGYARSRYDSCVYHRKLSDGSYVYLLLYMDDMLIAAKDMSKIRMLKG 118
RQW+ +F ++ G+ +S D Y K++ ++ +L+Y+DD++I + + + + LK
Sbjct: 244 RQWFLKFSVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKS 302
Query: 119 QLKGEFQMKDLGASRKILGMEIRRDRSAGKLFLSQKTYIEEL----------------SP 162
QLK F+++DLG + LG+EI RSA + + Q+ Y +L P
Sbjct: 303 QLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDP 360
Query: 163 TTDYET----EYMSRVPYANAVGSIMYVSVCTRPHISHAVSVVSRYMGRPGKGHWQAVKW 218
+ + +++ Y +G +MY+ + TR IS AV+ +S++ P H QAV
Sbjct: 361 SVTFSAHSGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMK 419
Query: 219 ILRYLGGTPELGL 231
IL Y+ GT GL
Sbjct: 420 ILHYIKGTVGQGL 432
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 142 bits (357), Expect = 2e-38, Method: Composition-based stats.
Identities = 85/253 (33%), Positives = 140/253 (55%), Gaps = 28/253 (11%)
Query: 3 ALYDMELEQLDVKTAFLHGELEEQIYMRQPEGFEILGKE----DHVCLLKKSLYGLKQSH 58
A+Y+ L QLD+ AFL+G+L+E+IYM+ P G+ + + VC LKKS+YGLKQ+
Sbjct: 184 AIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQAS 243
Query: 59 RQWYKRFDTFMVKNGYARSRYDSCVYHRKLSDGSYVYLLLYMDDMLIAAKDMSKIRMLKG 118
RQW+ +F ++ G+ +S D Y K++ ++ +L+Y+DD++I + + + + LK
Sbjct: 244 RQWFLKFSVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKS 302
Query: 119 QLKGEFQMKDLGASRKILGMEIRRDRSAGKLFLSQKTYIEEL----------------SP 162
QLK F+++DLG + LG+EI RSA + + Q+ Y +L P
Sbjct: 303 QLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDP 360
Query: 163 TTDYET----EYMSRVPYANAVGSIMYVSVCTRPHISHAVSVVSRYMGRPGKGHWQAVKW 218
+ + +++ Y +G +MY+ + TR IS AV+ +S++ P H QAV
Sbjct: 361 SVTFSAHSGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMK 419
Query: 219 ILRYLGGTPELGL 231
IL Y+ GT GL
Sbjct: 420 ILHYIKGTVGQGL 432
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 76.6 bits (187), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 22/157 (14%)
Query: 94 VYLLLYMDDMLIAAKDMSKIRMLKGQLKGEFQMKDLGASRKILGMEIRRDRSAGKLFLSQ 153
+YLLLY+DD+L+ + + ML QL F MKDLG LG++I+ S LFLSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 154 KTYIEEL-------------SP------TTDYETEYMSRVPYANAVGSIMYVSVCTRPHI 194
Y E++ +P ++ +Y + + VG++ Y+++ TRP I
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTL-TRPDI 117
Query: 195 SHAVSVVSRYMGRPGKGHWQAVKWILRYLGGTPELGL 231
S+AV++V + M P + +K +LRY+ GT GL
Sbjct: 118 SYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGL 154