BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000051.1_g0120.1
         (141 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G05850.1 | MuDR family transposase | Chr3:1743537-1745943 REV...    64   1e-12
AT1G06740.1 | MuDR family transposase | Chr1:2071194-2073374 FOR...    43   3e-05

>AT3G05850.1 | MuDR family transposase | Chr3:1743537-1745943
           REVERSE LENGTH=777 | 201606
          Length = 777

 Score = 64.3 bits (155), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 7/124 (5%)

Query: 22  WGDVFTEIGQIFPGGVKAFRHALGRYTIATKNNYKYIKNEPCRVTAVCSKPGCNWRIHGV 81
           W +  T +GQ F   V  FR AL +Y IA +  ++Y KN+  RVT  C   GC WRIH  
Sbjct: 199 WQNTITGVGQRFKN-VGEFREALRKYAIANQFGFRYKKNDSHRVTVKCKAEGCPWRIHA- 256

Query: 82  APLGCKSVFLLKEYEPKHDCLDVVLKPADPKLSSKLVGSLMDEDIRKHPNWS----TAEV 137
           + L    +  +K+  P H C +        + S   V S++ E ++  PN+      +++
Sbjct: 257 SRLSTTQLICIKKMNPTHTC-EGAGGINGLQTSRSWVASIIKEKLKVFPNYKPKDIVSDI 315

Query: 138 KEKF 141
           KE++
Sbjct: 316 KEEY 319


>AT1G06740.1 | MuDR family transposase | Chr1:2071194-2073374
           FORWARD LENGTH=726 | 201606
          Length = 726

 Score = 42.7 bits (99), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 2/103 (1%)

Query: 39  AFRHALGRYTIATKNNYKYIKNEPCRVTAVCSKPGCNWRIHGVAPLGCKSVFLLKEYEPK 98
           A R A+    I+ +   + IK++  R TA C+  GC WRIH  A +     F ++     
Sbjct: 167 ACRRAIKNAAISLRFEMRTIKSDKTRFTAKCNSKGCPWRIH-CAKVSNAPTFTIRTIHGS 225

Query: 99  HDCLDVVLKPADPKLSSKLVGSLMDEDIRKHPNWSTAEVKEKF 141
           H C  +       + S + V  ++ E ++++P++   E+ E+ 
Sbjct: 226 HTCGGIS-HLGHQQASVQWVADVVAEKLKENPHFKPKEILEEI 267


Top