BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0160.1
(415 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 122 7e-30
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 122 7e-30
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 74 1e-14
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 57 6e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 122 bits (307), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 128/214 (59%), Gaps = 5/214 (2%)
Query: 5 GNAVRQLEYSRIIGSLMYLMNCTRPDIAYSVSKLSRFTSNPNNTHWNAITRVLRYLRKTK 64
G+ V Y R+IG LMYL TR DI+++V+KLS+F+ P H A+ ++L Y++ T
Sbjct: 370 GDFVDAKAYRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTV 428
Query: 65 EYGLHYTTYPAV-LEGYADANWISDTDDTKSTSGYVFTLGGAAISWKSSKQTCIARSTMD 123
GL Y++ + L+ ++DA++ S D +ST+GY LG + ISWKS KQ +++S+ +
Sbjct: 429 GQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 488
Query: 124 SGFIALDKAGEEAEWLRQFLEDIPIWPKLVPAINIHCDNQAAIALAQSKMYNGKSRHIRR 183
+ + AL A +E WL QF ++ + P P + + CDN AAI +A + +++ +++HI
Sbjct: 489 AEYRALSFATDEMMWLAQFFRELQL-PLSKPTL-LFCDNTAAIHIATNAVFHERTKHIES 546
Query: 184 RHNTVKQLLSEGIITINYIRSKDNLADLFTKGLS 217
++V++ S T++Y + D FT+ LS
Sbjct: 547 DCHSVRE-RSVYQATLSYSFQAYDEQDGFTEYLS 579
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 122 bits (307), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 128/214 (59%), Gaps = 5/214 (2%)
Query: 5 GNAVRQLEYSRIIGSLMYLMNCTRPDIAYSVSKLSRFTSNPNNTHWNAITRVLRYLRKTK 64
G+ V Y R+IG LMYL TR DI+++V+KLS+F+ P H A+ ++L Y++ T
Sbjct: 370 GDFVDAKAYRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTV 428
Query: 65 EYGLHYTTYPAV-LEGYADANWISDTDDTKSTSGYVFTLGGAAISWKSSKQTCIARSTMD 123
GL Y++ + L+ ++DA++ S D +ST+GY LG + ISWKS KQ +++S+ +
Sbjct: 429 GQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 488
Query: 124 SGFIALDKAGEEAEWLRQFLEDIPIWPKLVPAINIHCDNQAAIALAQSKMYNGKSRHIRR 183
+ + AL A +E WL QF ++ + P P + + CDN AAI +A + +++ +++HI
Sbjct: 489 AEYRALSFATDEMMWLAQFFRELQL-PLSKPTL-LFCDNTAAIHIATNAVFHERTKHIES 546
Query: 184 RHNTVKQLLSEGIITINYIRSKDNLADLFTKGLS 217
++V++ S T++Y + D FT+ LS
Sbjct: 547 DCHSVRE-RSVYQATLSYSFQAYDEQDGFTEYLS 579
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 73.6 bits (179), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Query: 12 EYSRIIGSLMYLMNCTRPDIAYSVSKLSRFTSNPNNTHWNAITRVLRYLRKTKEYGLH-Y 70
++ I+G+L YL TRPDI+Y+V+ + + P ++ + RVLRY++ T +GL+ +
Sbjct: 99 DFRSIVGALQYL-TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIH 157
Query: 71 TTYPAVLEGYADANWISDTDDTKSTSGYVFTLGGAAISWKSSKQTCIARSTMDSGFIALD 130
++ + D++W T +ST+G+ LG ISW + +Q ++RS+ ++ + AL
Sbjct: 158 KNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALA 217
Query: 131 KAGEEAEW 138
E W
Sbjct: 218 LTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 57.0 bits (136), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 21 MYLMNCTRPDIAYSVSKLSRFTSNPNNTHWNAITRVLRYLRKTKEYGLHYT-TYPAVLEG 79
MYL TRPD+ ++V++LS+F+S A+ +VL Y++ T GL Y+ T L+
Sbjct: 1 MYL-TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 80 YADANWISDTDDTKSTSGY 98
+AD++W S D +S +G+
Sbjct: 60 FADSDWASCPDTRRSVTGF 78