BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0170.1
(305 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 239 8e-72
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 239 8e-72
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 102 2e-26
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 60 2e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 239 bits (611), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 174/264 (65%), Gaps = 7/264 (2%)
Query: 34 EPQTFTEAMTTPEAPFWKEAVNSEIESIMQNHTWELVDLPPGCKPLGCKWIFKRKLKTDG 93
EP T+ EA E W A++ EI ++ HTWE+ LPP KP+GCKW++K K +DG
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 94 SIDKYKARLVAKGFRQKEGLDYFDTYSPVSRITSIRVLVAIASLYNLEIHQMDVKTAFLD 153
+I++YKARLVAKG+ Q+EG+D+ +T+SPV ++TS+++++AI+++YN +HQ+D+ AFL+
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
Query: 154 GQLEEEIYMIQPEGFITAGQE----KKVCRLVKSLYGLKQAPKQWHLKFDDTLLSNGFKI 209
G L+EEIYM P G+ + VC L KS+YGLKQA +QW LKF TL+ GF
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261
Query: 210 NECDKCVYTKITAKGCVILCLYVDDMLIMGNNLDVINTTKKMLSKTFDMKDLGKAEVILG 269
+ D + KITA + + +YVDD++I NN ++ K L F ++DLG + LG
Sbjct: 262 SHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLG 321
Query: 270 IKVSKTAEGISLSQTHYVEKILEK 293
++++++A GI++ Q Y +L++
Sbjct: 322 LEIARSAAGINICQRKYALDLLDE 345
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 239 bits (611), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 174/264 (65%), Gaps = 7/264 (2%)
Query: 34 EPQTFTEAMTTPEAPFWKEAVNSEIESIMQNHTWELVDLPPGCKPLGCKWIFKRKLKTDG 93
EP T+ EA E W A++ EI ++ HTWE+ LPP KP+GCKW++K K +DG
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 94 SIDKYKARLVAKGFRQKEGLDYFDTYSPVSRITSIRVLVAIASLYNLEIHQMDVKTAFLD 153
+I++YKARLVAKG+ Q+EG+D+ +T+SPV ++TS+++++AI+++YN +HQ+D+ AFL+
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
Query: 154 GQLEEEIYMIQPEGFITAGQE----KKVCRLVKSLYGLKQAPKQWHLKFDDTLLSNGFKI 209
G L+EEIYM P G+ + VC L KS+YGLKQA +QW LKF TL+ GF
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261
Query: 210 NECDKCVYTKITAKGCVILCLYVDDMLIMGNNLDVINTTKKMLSKTFDMKDLGKAEVILG 269
+ D + KITA + + +YVDD++I NN ++ K L F ++DLG + LG
Sbjct: 262 SHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLG 321
Query: 270 IKVSKTAEGISLSQTHYVEKILEK 293
++++++A GI++ Q Y +L++
Sbjct: 322 LEIARSAAGINICQRKYALDLLDE 345
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 102 bits (255), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 78/118 (66%), Gaps = 5/118 (4%)
Query: 27 LTYMVENEPQTFTEAMTTPEAPFWKEAVNSEIESIMQNHTWELVDLPPGCKPLGCKWIFK 86
+T ++ EP++ A+ + P W +A+ E++++ +N TW LV P LGCKW+FK
Sbjct: 20 ITTTIKKEPKSVIFAL---KDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFK 76
Query: 87 RKLKTDGSIDKYKARLVAKGFRQKEGLDYFDTYSPVSRITSIRVLVAIASLYNLEIHQ 144
KL +DG++D+ KARLVAKGF Q+EG+ + +TYSPV R +IR ++ +A LE+ Q
Sbjct: 77 TKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQ--QLEVGQ 132
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 228 LCLYVDDMLIMGNNLDVINTTKKMLSKTFDMKDLGKAEVILGIKVSKTAEGISLSQTHYV 287
L LYVDD+L+ G++ ++N LS TF MKDLG LGI++ G+ LSQT Y
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 288 EKILEK 293
E+IL
Sbjct: 63 EQILNN 68