BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0240.1
(154 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G61140.1 | COP9 signalosome complex subunit 1 | Chr3:22626335... 97 5e-24
>AT3G61140.1 | COP9 signalosome complex subunit 1 |
Chr3:22626335-22628895 FORWARD LENGTH=441 | 201606
Length = 441
Score = 96.7 bits (239), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Query: 1 MRMEALRMAFDEVKRGENTQLFRDIVEKIDGKLGPAY--DKAWVDNIDPRAGLKKETLIN 58
++ +ALRMA+DE+K+GENTQLFR++V KI +LG Y D AW + +D RA KK L N
Sbjct: 65 LQFDALRMAYDEIKKGENTQLFREVVNKIGNRLGEKYGMDLAWCEAVDRRAEQKKVKLEN 124
Query: 59 EFNTYKTNLFKESIRTTYNDFRD 81
E ++Y+TNL KESIR YNDF D
Sbjct: 125 ELSSYRTNLIKESIRMGYNDFGD 147