BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0290.1
(254 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 118 8e-30
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 118 8e-30
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 91 9e-22
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 56 4e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 118 bits (295), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 5 KAVSTPLAPHFRLSGKQLSTTTVEKDHMDRIPYASAVGSLMYAMVCTRPDISQAVSVVSR 64
K S P+ P S D +D Y +G LMY + TR DIS AV+ +S+
Sbjct: 352 KPSSVPMDPSVTFSAHS------GGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQ 404
Query: 65 FMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVSGYVDSDYAGDLDRRRSTTGYV 123
F P H +AV +L Y+KGTV GL + Q+ + D+ + D RRST GY
Sbjct: 405 FSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYC 464
Query: 124 FRVHGAPVSWRSMLQSTVALSTTEAEYMAMVEGVKEALWLWGLLDGLGIK-QECVGVWCD 182
+ + +SW+S Q V+ S+ EAEY A+ E +WL L + + ++CD
Sbjct: 465 MFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCD 524
Query: 183 SQSAIHLAKNQVHHARTKHIDVRYHFVRD 211
+ +AIH+A N V H RTKHI+ H VR+
Sbjct: 525 NTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 118 bits (295), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 5 KAVSTPLAPHFRLSGKQLSTTTVEKDHMDRIPYASAVGSLMYAMVCTRPDISQAVSVVSR 64
K S P+ P S D +D Y +G LMY + TR DIS AV+ +S+
Sbjct: 352 KPSSVPMDPSVTFSAHS------GGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQ 404
Query: 65 FMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVSGYVDSDYAGDLDRRRSTTGYV 123
F P H +AV +L Y+KGTV GL + Q+ + D+ + D RRST GY
Sbjct: 405 FSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYC 464
Query: 124 FRVHGAPVSWRSMLQSTVALSTTEAEYMAMVEGVKEALWLWGLLDGLGIK-QECVGVWCD 182
+ + +SW+S Q V+ S+ EAEY A+ E +WL L + + ++CD
Sbjct: 465 MFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCD 524
Query: 183 SQSAIHLAKNQVHHARTKHIDVRYHFVRD 211
+ +AIH+A N V H RTKHI+ H VR+
Sbjct: 525 NTAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 91.3 bits (225), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 1 MQNAKAVSTPLAPHFRLSGKQLSTTTVEKDHMDRIPYASAVGSLMYAMVCTRPDISQAVS 60
M + K +STPL +L+++ + D + S VG+L Y + TRPDIS AV+
Sbjct: 71 MLDCKPMSTPLP-------LKLNSSVSTAKYPDPSDFRSIVGALQY-LTLTRPDISYAVN 122
Query: 61 VVSRFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVSGYVDSDYAGDLDRRRST 119
+V + M P ++ +K VLRY+KGT+ GL ++ V + DSD+AG RRST
Sbjct: 123 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRST 182
Query: 120 TGYVFRVHGAPVSWRSMLQSTVALSTTEAEYMAMVEGVKEALW 162
TG+ + +SW + Q TV+ S+TE EY A+ E W
Sbjct: 183 TGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 56.2 bits (134), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 45 MYAMVCTRPDISQAVSVVSRFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVSG 103
MY + TRPD++ AV+ +S+F + +AV VL Y+KGTV GL + + Q+
Sbjct: 1 MY-LTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 104 YVDSDYAGDLDRRRSTTGY 122
+ DSD+A D RRS TG+
Sbjct: 60 FADSDWASCPDTRRSVTGF 78