BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0310.1
(321 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G07840.2 | Sas10/Utp3/C1D family | Chr1:2424603-2426425 FORWA... 310 e-105
AT1G07840.1 | Sas10/Utp3/C1D family | Chr1:2424603-2426425 FORWA... 310 e-105
AT1G07840.3 | Sas10/Utp3/C1D family | Chr1:2424603-2426131 FORWA... 290 7e-98
AT2G43650.1 | Sas10/U3 ribonucleoprotein (Utp) family protein | ... 80 3e-16
>AT1G07840.2 | Sas10/Utp3/C1D family | Chr1:2424603-2426425 FORWARD
LENGTH=312 | 201606
Length = 312
Score = 310 bits (793), Expect = e-105, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 214/306 (69%), Gaps = 10/306 (3%)
Query: 14 VKKEVPQLLTLLKEMKDGLDTVTKKVQSLTLMVKDNQYPTADGISYLEAKHLLLLSYCQS 73
VKKE PQL ++L+EMK+ LD V KV++LT +VK N +PTA GISYLEAKHLLLLSYCQ
Sbjct: 13 VKKEAPQLASVLREMKNVLDVVRSKVEALTALVKANSFPTAGGISYLEAKHLLLLSYCQD 72
Query: 74 IVYYLLRKAKGFSIEGHPVVRSLVEIRLFLEKIRPIDKKMEYQIQKLTKVGGYSEEKTSE 133
+VYY+LRKAKG SI+GHP+VRSLVEIR+FLEKIRPIDKK++YQIQKLT GG E
Sbjct: 73 LVYYILRKAKGLSIDGHPLVRSLVEIRMFLEKIRPIDKKLQYQIQKLTTAGGPVTELAHS 132
Query: 134 DKKPSDSTQISENLLIYRPNPDLIIPGPTNASQGDGVYRPPKFAPTSLEDDKMSKLEKRV 193
+ K S Q SE+L Y+P PDL+ + + DGVYRPPKFAP S+E DK SK E+
Sbjct: 133 EGKGSCEAQKSEDLSNYKPKPDLLA-DKEDDQEDDGVYRPPKFAPMSME-DKTSKQERDA 190
Query: 194 KRKELHQVRQVKQNPYLTDIMNDYEGKPEEVRETVGTESRDVLRYRQNVEERSRAEENLF 253
RKE H RQ +N Y+ D+++D E +PEE+R+ G ES + R+ E + +AEE LF
Sbjct: 191 ARKEKHFFRQATENTYMKDVLDDLEDRPEEIRDYYGVESNEQKRFMAQYERQQKAEEELF 250
Query: 254 TRAPLTKMEKKKAKHLQKSRNGLRALTD-FYDDVKALPLYEEGDDNPMSFG-NASGGKKK 311
TRAP TK +KK+ K L KS +GL LT+ FYDD+K L ++ + P SFG N GG
Sbjct: 251 TRAPRTKEDKKREKRL-KSSSGLHELTENFYDDIKFL---DKDGEKPRSFGRNKRGG--P 304
Query: 312 FNKRKV 317
F KRK
Sbjct: 305 FKKRKT 310
>AT1G07840.1 | Sas10/Utp3/C1D family | Chr1:2424603-2426425 FORWARD
LENGTH=312 | 201606
Length = 312
Score = 310 bits (793), Expect = e-105, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 214/306 (69%), Gaps = 10/306 (3%)
Query: 14 VKKEVPQLLTLLKEMKDGLDTVTKKVQSLTLMVKDNQYPTADGISYLEAKHLLLLSYCQS 73
VKKE PQL ++L+EMK+ LD V KV++LT +VK N +PTA GISYLEAKHLLLLSYCQ
Sbjct: 13 VKKEAPQLASVLREMKNVLDVVRSKVEALTALVKANSFPTAGGISYLEAKHLLLLSYCQD 72
Query: 74 IVYYLLRKAKGFSIEGHPVVRSLVEIRLFLEKIRPIDKKMEYQIQKLTKVGGYSEEKTSE 133
+VYY+LRKAKG SI+GHP+VRSLVEIR+FLEKIRPIDKK++YQIQKLT GG E
Sbjct: 73 LVYYILRKAKGLSIDGHPLVRSLVEIRMFLEKIRPIDKKLQYQIQKLTTAGGPVTELAHS 132
Query: 134 DKKPSDSTQISENLLIYRPNPDLIIPGPTNASQGDGVYRPPKFAPTSLEDDKMSKLEKRV 193
+ K S Q SE+L Y+P PDL+ + + DGVYRPPKFAP S+E DK SK E+
Sbjct: 133 EGKGSCEAQKSEDLSNYKPKPDLLA-DKEDDQEDDGVYRPPKFAPMSME-DKTSKQERDA 190
Query: 194 KRKELHQVRQVKQNPYLTDIMNDYEGKPEEVRETVGTESRDVLRYRQNVEERSRAEENLF 253
RKE H RQ +N Y+ D+++D E +PEE+R+ G ES + R+ E + +AEE LF
Sbjct: 191 ARKEKHFFRQATENTYMKDVLDDLEDRPEEIRDYYGVESNEQKRFMAQYERQQKAEEELF 250
Query: 254 TRAPLTKMEKKKAKHLQKSRNGLRALTD-FYDDVKALPLYEEGDDNPMSFG-NASGGKKK 311
TRAP TK +KK+ K L KS +GL LT+ FYDD+K L ++ + P SFG N GG
Sbjct: 251 TRAPRTKEDKKREKRL-KSSSGLHELTENFYDDIKFL---DKDGEKPRSFGRNKRGG--P 304
Query: 312 FNKRKV 317
F KRK
Sbjct: 305 FKKRKT 310
>AT1G07840.3 | Sas10/Utp3/C1D family | Chr1:2424603-2426131 FORWARD
LENGTH=279 | 201606
Length = 279
Score = 290 bits (743), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 151/267 (56%), Positives = 190/267 (71%), Gaps = 2/267 (0%)
Query: 14 VKKEVPQLLTLLKEMKDGLDTVTKKVQSLTLMVKDNQYPTADGISYLEAKHLLLLSYCQS 73
VKKE PQL ++L+EMK+ LD V KV++LT +VK N +PTA GISYLEAKHLLLLSYCQ
Sbjct: 13 VKKEAPQLASVLREMKNVLDVVRSKVEALTALVKANSFPTAGGISYLEAKHLLLLSYCQD 72
Query: 74 IVYYLLRKAKGFSIEGHPVVRSLVEIRLFLEKIRPIDKKMEYQIQKLTKVGGYSEEKTSE 133
+VYY+LRKAKG SI+GHP+VRSLVEIR+FLEKIRPIDKK++YQIQKLT GG E
Sbjct: 73 LVYYILRKAKGLSIDGHPLVRSLVEIRMFLEKIRPIDKKLQYQIQKLTTAGGPVTELAHS 132
Query: 134 DKKPSDSTQISENLLIYRPNPDLIIPGPTNASQGDGVYRPPKFAPTSLEDDKMSKLEKRV 193
+ K S Q SE+L Y+P PDL + + + DGVYRPPKFAP S+E DK SK E+
Sbjct: 133 EGKGSCEAQKSEDLSNYKPKPDL-LADKEDDQEDDGVYRPPKFAPMSME-DKTSKQERDA 190
Query: 194 KRKELHQVRQVKQNPYLTDIMNDYEGKPEEVRETVGTESRDVLRYRQNVEERSRAEENLF 253
RKE H RQ +N Y+ D+++D E +PEE+R+ G ES + R+ E + +AEE LF
Sbjct: 191 ARKEKHFFRQATENTYMKDVLDDLEDRPEEIRDYYGVESNEQKRFMAQYERQQKAEEELF 250
Query: 254 TRAPLTKMEKKKAKHLQKSRNGLRALT 280
TRAP TK +KK+ K L+ S + AL
Sbjct: 251 TRAPRTKEDKKREKRLKSSSGYVFALV 277
>AT2G43650.1 | Sas10/U3 ribonucleoprotein (Utp) family protein |
Chr2:18099430-18103147 FORWARD LENGTH=654 | 201606
Length = 654
Score = 79.7 bits (195), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Query: 6 NSTDQNEQ---VKKEVPQLLTLLKEMKDGLDTVTKKVQSLTLMVKDNQYPTADGISYLEA 62
NS + EQ V P+++ LL E+ D ++ + K+ + +K+ + YLE
Sbjct: 221 NSLSKEEQMDVVYSSAPEIVGLLSELNDAVEELESKINPVMNKLKEGEISLNGLARYLEV 280
Query: 63 KHLLLLSYCQSIVYYLLRKAKGFSIEGHPVVRSLVEIRLFLEKIRPIDKKM 113
K LLLL+YCQSI +YLL K++G I HPV+ LVEI+ L+KI+ +D+++
Sbjct: 281 KQLLLLTYCQSITFYLLLKSEGQPIRDHPVLARLVEIKSLLDKIKELDEEL 331