BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0410.1
(211 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 75 2e-15
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 75 2e-15
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 50 2e-07
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 75.1 bits (183), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 70 RRSTTRYFTFVCGNLVTWRSKKQNVVARSSVESEFRGIPDGICEEL-LRLLLDDLGCPYE 128
RRST Y F+ +L++W+SKKQ VV++SS E+E+R + E + L +L P
Sbjct: 457 RRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLS 516
Query: 129 RPIRLYCDNKAACDTVHNPVQHDHTKHVVVGC 160
+P L+CDN AA N V H+ TKH+ C
Sbjct: 517 KPTLLFCDNTAAIHIATNAVFHERTKHIESDC 548
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 75.1 bits (183), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 70 RRSTTRYFTFVCGNLVTWRSKKQNVVARSSVESEFRGIPDGICEEL-LRLLLDDLGCPYE 128
RRST Y F+ +L++W+SKKQ VV++SS E+E+R + E + L +L P
Sbjct: 457 RRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLS 516
Query: 129 RPIRLYCDNKAACDTVHNPVQHDHTKHVVVGC 160
+P L+CDN AA N V H+ TKH+ C
Sbjct: 517 KPTLLFCDNTAAIHIATNAVFHERTKHIESDC 548
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 62 NWVGEVNGRRSTTRYFTFVCGNLVTWRSKKQNVVARSSVESEFRGI 107
+W G + RRSTT + TF+ N+++W +K+Q V+RSS E+E+R +
Sbjct: 171 DWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRAL 216