BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000051.1_g0430.1
         (681 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1...   196   9e-54
AT3G24255.5 | RNA-directed DNA polymerase (reverse transcriptase...   184   3e-50
AT3G24255.4 | RNA-directed DNA polymerase (reverse transcriptase...   184   3e-50
AT3G24255.7 | RNA-directed DNA polymerase (reverse transcriptase...   187   9e-50
AT3G24255.3 | RNA-directed DNA polymerase (reverse transcriptase...   133   5e-33

>AT1G43760.1 | DNAse I-like superfamily protein |
           Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
          Length = 626

 Score =  196 bits (497), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 189/362 (52%), Gaps = 5/362 (1%)

Query: 1   MDCPFTGCYLTWSNKQEGNARIAEKLDRVMINNEWLDSFERSTTFFPLPGISNHSPYILS 60
           +D P  G + TWSN Q+ N  I  KLDR + N +W  SF  +   F L G+S+HSP I+ 
Sbjct: 262 VDIPSRGVHYTWSNHQDDNP-IIRKLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIII 320

Query: 61  ITNTPRKGPRPFKFFNWWTTEPGFENVIREAWEIQVS-GNPMFILTRKLKNVKHALQWKS 119
           + N P++  + F++F++ +T P F   +  AWE Q+  G+ MF L   LK  K   +  +
Sbjct: 321 LENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLN 380

Query: 120 SRNI-DLLVLVEDAKTTMENIQTAASVFPHHLNVDIQEKEAVEIYARLVRAEENMLHQKA 178
            +   ++    ++A  ++E+IQ+     P      + E  A + +     A E+   QK+
Sbjct: 381 RQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRV-EHVARKKWNFFAAALESFYRQKS 439

Query: 179 KIKWLNEGDKNTKFFHHSIKERRARNTIGSIINVEGEHLEEEDEIAEESVRFFTQIFGTS 238
           +IKWL +GD NT+FFH  I   +A+N I  +   +   +E   ++ E  V ++T + G+ 
Sbjct: 440 RIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSD 499

Query: 239 HESKYNALTIQNTTIQSVLTEDE-GRQLTQPISRDEITLALASIGSDKSPGPNGFSAHFF 297
            +        +   I      D    +L+   S  EIT A+ ++  +K+PGP+ F+A FF
Sbjct: 500 SDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFF 559

Query: 298 KTYWSIISEEFVAAISNFFNRIKLLKELNSTLVTLIPKVPNASSFSEYRPISCMNVIYKC 357
              W ++ +  +AA+  FF    LLK  N+T +TLIPKV      S +RP+SC  V+YK 
Sbjct: 560 WESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKI 619

Query: 358 IT 359
           IT
Sbjct: 620 IT 621


>AT3G24255.5 | RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein |
           Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
          Length = 532

 Score =  184 bits (466), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 134/202 (66%)

Query: 480 VISHLCFADDMLVFIRGDKKSAEGLREVLSTFSACTGLQVNSSKSEVYCAGMTEEARGEI 539
           +I+HLCFADD+LVF  G K S EG+ ++   F+  +GLQ++  KS +Y AG+ +  + +I
Sbjct: 7   LITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTIYMAGVKDNDKADI 66

Query: 540 IQTLNFSVGKLPIKYLGLPLISSRLSYSDCVPLLNHLTRRIQSWKARFLSYAGRILLIKA 599
           + +  F+ G LP++YLGLPL++ +++ SD  PL+  +  RI  W AR LS+AGR+ LI +
Sbjct: 67  LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126

Query: 600 VLLGMIVYWTACFTLPRRVHKEIESTLNKFLWTVTDLSSKKSNVAWPNICFPVEEGGLSI 659
           V+  +  +W + F LP    KEI+S  + FLW+  +L++KK+ VAW ++C P +EGGL I
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186

Query: 660 RSVYHMNKAANMRHVWDIIDGS 681
           RS+   NK + ++ +W ++  +
Sbjct: 187 RSLKEANKVSLLKLIWRMLSST 208


>AT3G24255.4 | RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein |
           Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
          Length = 532

 Score =  184 bits (466), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 134/202 (66%)

Query: 480 VISHLCFADDMLVFIRGDKKSAEGLREVLSTFSACTGLQVNSSKSEVYCAGMTEEARGEI 539
           +I+HLCFADD+LVF  G K S EG+ ++   F+  +GLQ++  KS +Y AG+ +  + +I
Sbjct: 7   LITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTIYMAGVKDNDKADI 66

Query: 540 IQTLNFSVGKLPIKYLGLPLISSRLSYSDCVPLLNHLTRRIQSWKARFLSYAGRILLIKA 599
           + +  F+ G LP++YLGLPL++ +++ SD  PL+  +  RI  W AR LS+AGR+ LI +
Sbjct: 67  LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126

Query: 600 VLLGMIVYWTACFTLPRRVHKEIESTLNKFLWTVTDLSSKKSNVAWPNICFPVEEGGLSI 659
           V+  +  +W + F LP    KEI+S  + FLW+  +L++KK+ VAW ++C P +EGGL I
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186

Query: 660 RSVYHMNKAANMRHVWDIIDGS 681
           RS+   NK + ++ +W ++  +
Sbjct: 187 RSLKEANKVSLLKLIWRMLSST 208


>AT3G24255.7 | RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein |
           Chr3:8789309-8793208 FORWARD LENGTH=828 | 201606
          Length = 828

 Score =  187 bits (474), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 134/202 (66%)

Query: 480 VISHLCFADDMLVFIRGDKKSAEGLREVLSTFSACTGLQVNSSKSEVYCAGMTEEARGEI 539
           +I+HLCFADD+LVF  G K S EG+ ++   F+  +GLQ++  KS +Y AG+ +  + +I
Sbjct: 7   LITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTIYMAGVKDNDKADI 66

Query: 540 IQTLNFSVGKLPIKYLGLPLISSRLSYSDCVPLLNHLTRRIQSWKARFLSYAGRILLIKA 599
           + +  F+ G LP++YLGLPL++ +++ SD  PL+  +  RI  W AR LS+AGR+ LI +
Sbjct: 67  LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126

Query: 600 VLLGMIVYWTACFTLPRRVHKEIESTLNKFLWTVTDLSSKKSNVAWPNICFPVEEGGLSI 659
           V+  +  +W + F LP    KEI+S  + FLW+  +L++KK+ VAW ++C P +EGGL I
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186

Query: 660 RSVYHMNKAANMRHVWDIIDGS 681
           RS+   NK + ++ +W ++  +
Sbjct: 187 RSLKEANKVSLLKLIWRMLSST 208


>AT3G24255.3 | RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein |
           Chr3:8789471-8790907 FORWARD LENGTH=478 | 201606
          Length = 478

 Score =  133 bits (335), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 100/153 (65%)

Query: 529 AGMTEEARGEIIQTLNFSVGKLPIKYLGLPLISSRLSYSDCVPLLNHLTRRIQSWKARFL 588
           AG+ +  + +I+ +  F+ G LP++YLGLPL++ +++ SD  PL+  +  RI  W AR L
Sbjct: 2   AGVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHL 61

Query: 589 SYAGRILLIKAVLLGMIVYWTACFTLPRRVHKEIESTLNKFLWTVTDLSSKKSNVAWPNI 648
           S+AGR+ LI +V+  +  +W + F LP    KEI+S  + FLW+  +L++KK+ VAW ++
Sbjct: 62  SFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDV 121

Query: 649 CFPVEEGGLSIRSVYHMNKAANMRHVWDIIDGS 681
           C P +EGGL IRS+   NK + ++ +W ++  +
Sbjct: 122 CTPKDEGGLGIRSLKEANKVSLLKLIWRMLSST 154


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