BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0430.1
(681 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 196 9e-54
AT3G24255.5 | RNA-directed DNA polymerase (reverse transcriptase... 184 3e-50
AT3G24255.4 | RNA-directed DNA polymerase (reverse transcriptase... 184 3e-50
AT3G24255.7 | RNA-directed DNA polymerase (reverse transcriptase... 187 9e-50
AT3G24255.3 | RNA-directed DNA polymerase (reverse transcriptase... 133 5e-33
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 196 bits (497), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 189/362 (52%), Gaps = 5/362 (1%)
Query: 1 MDCPFTGCYLTWSNKQEGNARIAEKLDRVMINNEWLDSFERSTTFFPLPGISNHSPYILS 60
+D P G + TWSN Q+ N I KLDR + N +W SF + F L G+S+HSP I+
Sbjct: 262 VDIPSRGVHYTWSNHQDDNP-IIRKLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIII 320
Query: 61 ITNTPRKGPRPFKFFNWWTTEPGFENVIREAWEIQVS-GNPMFILTRKLKNVKHALQWKS 119
+ N P++ + F++F++ +T P F + AWE Q+ G+ MF L LK K + +
Sbjct: 321 LENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLN 380
Query: 120 SRNI-DLLVLVEDAKTTMENIQTAASVFPHHLNVDIQEKEAVEIYARLVRAEENMLHQKA 178
+ ++ ++A ++E+IQ+ P + E A + + A E+ QK+
Sbjct: 381 RQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRV-EHVARKKWNFFAAALESFYRQKS 439
Query: 179 KIKWLNEGDKNTKFFHHSIKERRARNTIGSIINVEGEHLEEEDEIAEESVRFFTQIFGTS 238
+IKWL +GD NT+FFH I +A+N I + + +E ++ E V ++T + G+
Sbjct: 440 RIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSD 499
Query: 239 HESKYNALTIQNTTIQSVLTEDE-GRQLTQPISRDEITLALASIGSDKSPGPNGFSAHFF 297
+ + I D +L+ S EIT A+ ++ +K+PGP+ F+A FF
Sbjct: 500 SDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFF 559
Query: 298 KTYWSIISEEFVAAISNFFNRIKLLKELNSTLVTLIPKVPNASSFSEYRPISCMNVIYKC 357
W ++ + +AA+ FF LLK N+T +TLIPKV S +RP+SC V+YK
Sbjct: 560 WESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKI 619
Query: 358 IT 359
IT
Sbjct: 620 IT 621
>AT3G24255.5 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
Length = 532
Score = 184 bits (466), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 134/202 (66%)
Query: 480 VISHLCFADDMLVFIRGDKKSAEGLREVLSTFSACTGLQVNSSKSEVYCAGMTEEARGEI 539
+I+HLCFADD+LVF G K S EG+ ++ F+ +GLQ++ KS +Y AG+ + + +I
Sbjct: 7 LITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTIYMAGVKDNDKADI 66
Query: 540 IQTLNFSVGKLPIKYLGLPLISSRLSYSDCVPLLNHLTRRIQSWKARFLSYAGRILLIKA 599
+ + F+ G LP++YLGLPL++ +++ SD PL+ + RI W AR LS+AGR+ LI +
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 600 VLLGMIVYWTACFTLPRRVHKEIESTLNKFLWTVTDLSSKKSNVAWPNICFPVEEGGLSI 659
V+ + +W + F LP KEI+S + FLW+ +L++KK+ VAW ++C P +EGGL I
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 660 RSVYHMNKAANMRHVWDIIDGS 681
RS+ NK + ++ +W ++ +
Sbjct: 187 RSLKEANKVSLLKLIWRMLSST 208
>AT3G24255.4 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
Length = 532
Score = 184 bits (466), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 134/202 (66%)
Query: 480 VISHLCFADDMLVFIRGDKKSAEGLREVLSTFSACTGLQVNSSKSEVYCAGMTEEARGEI 539
+I+HLCFADD+LVF G K S EG+ ++ F+ +GLQ++ KS +Y AG+ + + +I
Sbjct: 7 LITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTIYMAGVKDNDKADI 66
Query: 540 IQTLNFSVGKLPIKYLGLPLISSRLSYSDCVPLLNHLTRRIQSWKARFLSYAGRILLIKA 599
+ + F+ G LP++YLGLPL++ +++ SD PL+ + RI W AR LS+AGR+ LI +
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 600 VLLGMIVYWTACFTLPRRVHKEIESTLNKFLWTVTDLSSKKSNVAWPNICFPVEEGGLSI 659
V+ + +W + F LP KEI+S + FLW+ +L++KK+ VAW ++C P +EGGL I
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 660 RSVYHMNKAANMRHVWDIIDGS 681
RS+ NK + ++ +W ++ +
Sbjct: 187 RSLKEANKVSLLKLIWRMLSST 208
>AT3G24255.7 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8793208 FORWARD LENGTH=828 | 201606
Length = 828
Score = 187 bits (474), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 134/202 (66%)
Query: 480 VISHLCFADDMLVFIRGDKKSAEGLREVLSTFSACTGLQVNSSKSEVYCAGMTEEARGEI 539
+I+HLCFADD+LVF G K S EG+ ++ F+ +GLQ++ KS +Y AG+ + + +I
Sbjct: 7 LITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTIYMAGVKDNDKADI 66
Query: 540 IQTLNFSVGKLPIKYLGLPLISSRLSYSDCVPLLNHLTRRIQSWKARFLSYAGRILLIKA 599
+ + F+ G LP++YLGLPL++ +++ SD PL+ + RI W AR LS+AGR+ LI +
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 600 VLLGMIVYWTACFTLPRRVHKEIESTLNKFLWTVTDLSSKKSNVAWPNICFPVEEGGLSI 659
V+ + +W + F LP KEI+S + FLW+ +L++KK+ VAW ++C P +EGGL I
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 660 RSVYHMNKAANMRHVWDIIDGS 681
RS+ NK + ++ +W ++ +
Sbjct: 187 RSLKEANKVSLLKLIWRMLSST 208
>AT3G24255.3 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789471-8790907 FORWARD LENGTH=478 | 201606
Length = 478
Score = 133 bits (335), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 100/153 (65%)
Query: 529 AGMTEEARGEIIQTLNFSVGKLPIKYLGLPLISSRLSYSDCVPLLNHLTRRIQSWKARFL 588
AG+ + + +I+ + F+ G LP++YLGLPL++ +++ SD PL+ + RI W AR L
Sbjct: 2 AGVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHL 61
Query: 589 SYAGRILLIKAVLLGMIVYWTACFTLPRRVHKEIESTLNKFLWTVTDLSSKKSNVAWPNI 648
S+AGR+ LI +V+ + +W + F LP KEI+S + FLW+ +L++KK+ VAW ++
Sbjct: 62 SFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDV 121
Query: 649 CFPVEEGGLSIRSVYHMNKAANMRHVWDIIDGS 681
C P +EGGL IRS+ NK + ++ +W ++ +
Sbjct: 122 CTPKDEGGLGIRSLKEANKVSLLKLIWRMLSST 154