BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0450.1
(824 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 451 e-144
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 451 e-144
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 228 5e-69
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 125 5e-33
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 84 6e-19
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 451 bits (1161), Expect = e-144, Method: Compositional matrix adjust.
Identities = 228/509 (44%), Positives = 324/509 (63%), Gaps = 9/509 (1%)
Query: 304 AYLSILHLPTEPSTYKEAAKSIEWCKAMNDEFLALQQNKTWSLVPYDSKMNVLGCKWVYK 363
++L + EPSTY EA + + WC AM+DE A++ TW + +GCKWVYK
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 364 LKQKSDGTIERYKARLVAKGFHQQEGVDFAETFSPVVKASTIRLILTIAVTKSWYIKQLD 423
+K SDGTIERYKARLVAKG+ QQEG+DF ETFSPV K ++++LIL I+ ++ + QLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 424 VSNAFLHGVLEENVYMIQPPGFIDKENE----DYVCHLHKALYGLKQAPRAWFNRFATFL 479
+SNAFL+G L+E +YM PPG+ ++ + + VC+L K++YGLKQA R WF +F+ L
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 480 FQYGFKKSKTDHSMFVFHSNMDMIVLLLYVDDIILTGSSSSMITQLITDLSVAFKMKDLG 539
+GF +S +DH+ F+ + + +L+YVDDII+ ++ + + +L + L FK++DLG
Sbjct: 255 IGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLG 314
Query: 540 SLSYFLGIKVFSDINNKSMLLTQKKYTLQLLQKASLLDSKPSKLPVPSGQRVSISESVEL 599
L YFLG+++ + + + Q+KY L LL + LL KPS +P+ S +
Sbjct: 315 PLKYFLGLEIAR--SAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372
Query: 600 SSPTEYRILVGALQYLTLTRPDISFAVNYTAQFMHKPTEKHLVIVKKILRYLKGSVGSGI 659
YR L+G L YL +TR DISFAVN +QF P H V KIL Y+KG+VG G+
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432
Query: 660 KISSGDLSILSAYSDSDWVGCPDSRKSTGGFCVFLGSSLISWSSKKQATVAKSSTEAEYK 719
SS L +SD+ + C D+R+ST G+C+FLG+SLISW SKKQ V+KSS EAEY+
Sbjct: 433 FYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYR 492
Query: 720 SLSTTATELVWISYLMDELRFPLKKPYLLHCDNISAKHLASNPIFHTRTKHIEVDYHYVR 779
+LS E++W++ EL+ PL KP LL CDN +A H+A+N +FH RTKHIE D H VR
Sbjct: 493 ALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVR 552
Query: 780 DL-VSDGSISIQYIPTKDQLADIFTKGLS 807
+ V ++S + +Q D FT+ LS
Sbjct: 553 ERSVYQATLSYSFQAYDEQ--DGFTEYLS 579
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 451 bits (1161), Expect = e-144, Method: Compositional matrix adjust.
Identities = 228/509 (44%), Positives = 324/509 (63%), Gaps = 9/509 (1%)
Query: 304 AYLSILHLPTEPSTYKEAAKSIEWCKAMNDEFLALQQNKTWSLVPYDSKMNVLGCKWVYK 363
++L + EPSTY EA + + WC AM+DE A++ TW + +GCKWVYK
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 364 LKQKSDGTIERYKARLVAKGFHQQEGVDFAETFSPVVKASTIRLILTIAVTKSWYIKQLD 423
+K SDGTIERYKARLVAKG+ QQEG+DF ETFSPV K ++++LIL I+ ++ + QLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 424 VSNAFLHGVLEENVYMIQPPGFIDKENE----DYVCHLHKALYGLKQAPRAWFNRFATFL 479
+SNAFL+G L+E +YM PPG+ ++ + + VC+L K++YGLKQA R WF +F+ L
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 480 FQYGFKKSKTDHSMFVFHSNMDMIVLLLYVDDIILTGSSSSMITQLITDLSVAFKMKDLG 539
+GF +S +DH+ F+ + + +L+YVDDII+ ++ + + +L + L FK++DLG
Sbjct: 255 IGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLG 314
Query: 540 SLSYFLGIKVFSDINNKSMLLTQKKYTLQLLQKASLLDSKPSKLPVPSGQRVSISESVEL 599
L YFLG+++ + + + Q+KY L LL + LL KPS +P+ S +
Sbjct: 315 PLKYFLGLEIAR--SAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372
Query: 600 SSPTEYRILVGALQYLTLTRPDISFAVNYTAQFMHKPTEKHLVIVKKILRYLKGSVGSGI 659
YR L+G L YL +TR DISFAVN +QF P H V KIL Y+KG+VG G+
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432
Query: 660 KISSGDLSILSAYSDSDWVGCPDSRKSTGGFCVFLGSSLISWSSKKQATVAKSSTEAEYK 719
SS L +SD+ + C D+R+ST G+C+FLG+SLISW SKKQ V+KSS EAEY+
Sbjct: 433 FYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYR 492
Query: 720 SLSTTATELVWISYLMDELRFPLKKPYLLHCDNISAKHLASNPIFHTRTKHIEVDYHYVR 779
+LS E++W++ EL+ PL KP LL CDN +A H+A+N +FH RTKHIE D H VR
Sbjct: 493 ALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVR 552
Query: 780 DL-VSDGSISIQYIPTKDQLADIFTKGLS 807
+ V ++S + +Q D FT+ LS
Sbjct: 553 ERSVYQATLSYSFQAYDEQ--DGFTEYLS 579
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 228 bits (582), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 158/230 (68%), Gaps = 3/230 (1%)
Query: 503 IVLLLYVDDIILTGSSSSMITQLITDLSVAFKMKDLGSLSYFLGIKVFSDINNKSMLLTQ 562
+ LLLYVDDI+LTGSS++++ LI LS F MKDLG + YFLGI++ + + L+Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQ 58
Query: 563 KKYTLQLLQKASLLDSKPSKLPVPSGQRVSISESVELSSPTEYRILVGALQYLTLTRPDI 622
KY Q+L A +LD KP P+P S+S + + P+++R +VGALQYLTLTRPDI
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLPLKLNSSVS-TAKYPDPSDFRSIVGALQYLTLTRPDI 117
Query: 623 SFAVNYTAQFMHKPTEKHLVIVKKILRYLKGSVGSGIKISSGDLSILSAYSDSDWVGCPD 682
S+AVN Q MH+PT ++K++LRY+KG++ G+ I + A+ DSDW GC
Sbjct: 118 SYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTS 177
Query: 683 SRKSTGGFCVFLGSSLISWSSKKQATVAKSSTEAEYKSLSTTATELVWIS 732
+R+ST GFC FLG ++ISWS+K+Q TV++SSTE EY++L+ TA EL W S
Sbjct: 178 TRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSS 227
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 125 bits (315), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 72/99 (72%)
Query: 314 EPSTYKEAAKSIEWCKAMNDEFLALQQNKTWSLVPYDSKMNVLGCKWVYKLKQKSDGTIE 373
EP + A K WC+AM +E AL +NKTW LVP N+LGCKWV+K K SDGT++
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 374 RYKARLVAKGFHQQEGVDFAETFSPVVKASTIRLILTIA 412
R KARLVAKGFHQ+EG+ F ET+SPVV+ +TIR IL +A
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 83.6 bits (205), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 614 YLTLTRPDISFAVNYTAQFMHKPTEKHLVIVKKILRYLKGSVGSGIKISSGDLSILSAYS 673
YLT+TRPD++FAVN +QF + V K+L Y+KG+VG G+ S+ L A++
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 674 DSDWVGCPDSRKSTGGFC 691
DSDW CPD+R+S GFC
Sbjct: 62 DSDWASCPDTRRSVTGFC 79