BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0480.1
(869 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24255.7 | RNA-directed DNA polymerase (reverse transcriptase... 115 4e-26
AT3G24255.5 | RNA-directed DNA polymerase (reverse transcriptase... 114 4e-26
AT3G24255.4 | RNA-directed DNA polymerase (reverse transcriptase... 114 4e-26
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 89 9e-18
AT3G24255.3 | RNA-directed DNA polymerase (reverse transcriptase... 87 2e-17
>AT3G24255.7 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8793208 FORWARD LENGTH=828 | 201606
Length = 828
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 135/304 (44%), Gaps = 26/304 (8%)
Query: 391 ISHLLFADDCIIFGKNTIDNIHNLKKILQEFCDTSGQMINYAKSNILYSKNSHPKFKRLI 450
I+HL FADD ++F +I + +I +F D SG I+ KS I Y K I
Sbjct: 8 ITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTI-YMAGVKDNDKADI 66
Query: 451 MRTLKVKYASTSEKCPGAQLFIGAQKTKVFNDILDHIKNKLNKWNHSFLSQAGRTVVISA 510
+ + + + G L T + +++ I+ ++ KW LS AGR +IS+
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 511 IAAAVPRYQMQCFAIPKGISKRIKSVQRNFWWG---MSKGICIKAWSYNCLPKNLGGLGI 567
+ ++ + M F +P K I S+ +F W ++ AWS C PK+ GGLGI
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 568 HLPELDNTALLTQLAWRLKTEPETAWVK------LLKAKYFPLSDKPCPANPHHSWSWKT 621
+ N L +L WR+ + + WV+ L K ++ +S SW WK
Sbjct: 187 RSLKEANKVSLLKLIWRMLSST-SLWVQWLRLYLLRKGSFWSISGNTTLG----SWMWKK 241
Query: 622 IRKHYNLIEDLATWEVQSGNDINIWEDNWIPEINNLPVRARIGKYIDNNLNCPNCINIET 681
I KH L ++ +G++ + W DNW ++IG+ ID CI++
Sbjct: 242 ILKHRALASGFVKHDIHNGSNTSFWFDNW----------SKIGRLIDVT-GHRGCIDMGI 290
Query: 682 IEHA 685
HA
Sbjct: 291 TLHA 294
>AT3G24255.5 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
Length = 532
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 135/303 (44%), Gaps = 24/303 (7%)
Query: 391 ISHLLFADDCIIFGKNTIDNIHNLKKILQEFCDTSGQMINYAKSNILYSKNSHPKFKRLI 450
I+HL FADD ++F +I + +I +F D SG I+ KS I Y K I
Sbjct: 8 ITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTI-YMAGVKDNDKADI 66
Query: 451 MRTLKVKYASTSEKCPGAQLFIGAQKTKVFNDILDHIKNKLNKWNHSFLSQAGRTVVISA 510
+ + + + G L T + +++ I+ ++ KW LS AGR +IS+
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 511 IAAAVPRYQMQCFAIPKGISKRIKSVQRNFWWG---MSKGICIKAWSYNCLPKNLGGLGI 567
+ ++ + M F +P K I S+ +F W ++ AWS C PK+ GGLGI
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 568 HLPELDNTALLTQLAWRL--KTEPETAWVKLL---KAKYFPLSDKPCPANPHHSWSWKTI 622
+ N L +L WR+ T W++L K ++ +S SW WK I
Sbjct: 187 RSLKEANKVSLLKLIWRMLSSTSLWVQWLRLYLLRKGSFWSISGNTTLG----SWMWKKI 242
Query: 623 RKHYNLIEDLATWEVQSGNDINIWEDNWIPEINNLPVRARIGKYIDNNLNCPNCINIETI 682
KH L ++ +G++ + W DNW ++IG+ ID + CI++
Sbjct: 243 LKHRALASGFVKHDIHNGSNTSFWFDNW----------SKIGRLIDVTGH-RGCIDMGIT 291
Query: 683 EHA 685
HA
Sbjct: 292 LHA 294
>AT3G24255.4 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
Length = 532
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 135/303 (44%), Gaps = 24/303 (7%)
Query: 391 ISHLLFADDCIIFGKNTIDNIHNLKKILQEFCDTSGQMINYAKSNILYSKNSHPKFKRLI 450
I+HL FADD ++F +I + +I +F D SG I+ KS I Y K I
Sbjct: 8 ITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTI-YMAGVKDNDKADI 66
Query: 451 MRTLKVKYASTSEKCPGAQLFIGAQKTKVFNDILDHIKNKLNKWNHSFLSQAGRTVVISA 510
+ + + + G L T + +++ I+ ++ KW LS AGR +IS+
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 511 IAAAVPRYQMQCFAIPKGISKRIKSVQRNFWWG---MSKGICIKAWSYNCLPKNLGGLGI 567
+ ++ + M F +P K I S+ +F W ++ AWS C PK+ GGLGI
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 568 HLPELDNTALLTQLAWRL--KTEPETAWVKLL---KAKYFPLSDKPCPANPHHSWSWKTI 622
+ N L +L WR+ T W++L K ++ +S SW WK I
Sbjct: 187 RSLKEANKVSLLKLIWRMLSSTSLWVQWLRLYLLRKGSFWSISGNTTLG----SWMWKKI 242
Query: 623 RKHYNLIEDLATWEVQSGNDINIWEDNWIPEINNLPVRARIGKYIDNNLNCPNCINIETI 682
KH L ++ +G++ + W DNW ++IG+ ID + CI++
Sbjct: 243 LKHRALASGFVKHDIHNGSNTSFWFDNW----------SKIGRLIDVTGH-RGCIDMGIT 291
Query: 683 EHA 685
HA
Sbjct: 292 LHA 294
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 5/190 (2%)
Query: 50 ESLWKEKSRNNFLILGDKNTKYFHSQAIQRNRCNKIRAIKDNNGDWKEDIKDIQDIISAH 109
ES +++KSR +L GD NT++FH + N I+ ++ ++ E++ ++++I A+
Sbjct: 432 ESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAY 491
Query: 110 LLNISTTSNPKEDSSTLNLFNSVITHEQNIDLI----AIPSKEEIDQAIQSLKKEAAPGP 165
++ + + ++ + N L A+PS +EI A+ ++ + APGP
Sbjct: 492 YTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGP 551
Query: 166 DGYPP-FFQSNWETISPDIYELVQNFFKTTYLPPEINHTHICLIPKTPIPQTLADYRPIS 224
D + FF +W + V+ FF+T +L N T I LIPK L+ +RP+S
Sbjct: 552 DSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVS 611
Query: 225 LLNTTYKIIT 234
YKIIT
Sbjct: 612 CCTVVYKIIT 621
>AT3G24255.3 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789471-8790907 FORWARD LENGTH=478 | 201606
Length = 478
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 23/227 (10%)
Query: 467 GAQLFIGAQKTKVFNDILDHIKNKLNKWNHSFLSQAGRTVVISAIAAAVPRYQMQCFAIP 526
G L T + +++ I+ ++ KW LS AGR +IS++ ++ + M F +P
Sbjct: 29 GLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFWMSAFRLP 88
Query: 527 KGISKRIKSVQRNFWWG---MSKGICIKAWSYNCLPKNLGGLGIHLPELDNTALLTQLAW 583
K I S+ +F W ++ AWS C PK+ GGLGI + N L +L W
Sbjct: 89 SACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEANKVSLLKLIW 148
Query: 584 RL--KTEPETAWVKLL---KAKYFPLSDKPCPANPHHSWSWKTIRKHYNLIEDLATWEVQ 638
R+ T W++L K ++ +S SW WK I KH L ++
Sbjct: 149 RMLSSTSLWVQWLRLYLLRKGSFWSISGNTTLG----SWMWKKILKHRALASGFVKHDIH 204
Query: 639 SGNDINIWEDNWIPEINNLPVRARIGKYIDNNLNCPNCINIETIEHA 685
+G++ + W DNW ++IG+ ID + CI++ HA
Sbjct: 205 NGSNTSFWFDNW----------SKIGRLIDVTGH-RGCIDMGITLHA 240