BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0490.1
(312 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G46610.2 | Pentatricopeptide repeat (PPR-like) superfamily pr... 246 4e-76
AT3G46610.1 | Pentatricopeptide repeat (PPR-like) superfamily pr... 246 4e-76
AT3G15200.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 52 2e-07
AT5G59900.1 | Pentatricopeptide repeat (PPR) superfamily protein... 47 1e-05
AT2G26790.2 | Pentatricopeptide repeat (PPR) superfamily protein... 47 2e-05
>AT3G46610.2 | Pentatricopeptide repeat (PPR-like) superfamily
protein | Chr3:17160224-17162221 REVERSE LENGTH=665 |
201606
Length = 665
Score = 246 bits (627), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 139/184 (75%), Gaps = 2/184 (1%)
Query: 1 MVDGNGALKFFVELKEKYQKEEIRKEIAEDWESEFVKLEKFVICVCYQVMRCWLVKCDDH 60
M DG GAL+FFVEL+EKY K EI ++ DWE EFVKLE F+ +CYQVMR WLVK D+
Sbjct: 267 MEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNW 326
Query: 61 LNTNNVFKLLKEMYSAGLRPDRITHEKLVWVCTLEGHDSVAKELYSRIRERKSEISLSVC 120
T V KLL M SAG+RP R HE+L+W CT E H V KELY RIRER SEISLSVC
Sbjct: 327 --TTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVC 384
Query: 121 NHVIWLLCKAKKWWTALRVYEDLLDKGPKPNNLPNELIISHFNILLTSARKREIWKWGDE 180
NH+IWL+ KAKKWW AL +YEDLLD+GP+PNNL EL++SHFNILL++A KR IW+WG
Sbjct: 385 NHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVR 444
Query: 181 DFNQ 184
N+
Sbjct: 445 LLNK 448
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 59/144 (40%), Gaps = 42/144 (29%)
Query: 69 LLKEMYSAGLRPDRITHEKLVWVCTLEGHDSVAKELYSRIRERKSEISLSVCNHVIWLLC 128
LLKEM S G+ P +T ++ C G VA E + R++ E
Sbjct: 550 LLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVE-------------- 595
Query: 129 KAKKWWTALRVYEDLLDKGPKPNNLPNELIISHFNILLTSARKREIW----KWGDEDFNQ 184
PN + E++I L A+ R + K +E
Sbjct: 596 ---------------------PNEITYEMLIEA---LANDAKPRLAYELHVKAQNEGLKL 631
Query: 185 SSKAYDAVVESAKVYGATIDINSL 208
SSK YDAVV+SA+ YGATID+N L
Sbjct: 632 SSKPYDAVVKSAETYGATIDLNLL 655
>AT3G46610.1 | Pentatricopeptide repeat (PPR-like) superfamily
protein | Chr3:17160224-17162221 REVERSE LENGTH=665 |
201606
Length = 665
Score = 246 bits (627), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 139/184 (75%), Gaps = 2/184 (1%)
Query: 1 MVDGNGALKFFVELKEKYQKEEIRKEIAEDWESEFVKLEKFVICVCYQVMRCWLVKCDDH 60
M DG GAL+FFVEL+EKY K EI ++ DWE EFVKLE F+ +CYQVMR WLVK D+
Sbjct: 267 MEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNW 326
Query: 61 LNTNNVFKLLKEMYSAGLRPDRITHEKLVWVCTLEGHDSVAKELYSRIRERKSEISLSVC 120
T V KLL M SAG+RP R HE+L+W CT E H V KELY RIRER SEISLSVC
Sbjct: 327 --TTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVC 384
Query: 121 NHVIWLLCKAKKWWTALRVYEDLLDKGPKPNNLPNELIISHFNILLTSARKREIWKWGDE 180
NH+IWL+ KAKKWW AL +YEDLLD+GP+PNNL EL++SHFNILL++A KR IW+WG
Sbjct: 385 NHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVR 444
Query: 181 DFNQ 184
N+
Sbjct: 445 LLNK 448
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 59/144 (40%), Gaps = 42/144 (29%)
Query: 69 LLKEMYSAGLRPDRITHEKLVWVCTLEGHDSVAKELYSRIRERKSEISLSVCNHVIWLLC 128
LLKEM S G+ P +T ++ C G VA E + R++ E
Sbjct: 550 LLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVE-------------- 595
Query: 129 KAKKWWTALRVYEDLLDKGPKPNNLPNELIISHFNILLTSARKREIW----KWGDEDFNQ 184
PN + E++I L A+ R + K +E
Sbjct: 596 ---------------------PNEITYEMLIEA---LANDAKPRLAYELHVKAQNEGLKL 631
Query: 185 SSKAYDAVVESAKVYGATIDINSL 208
SSK YDAVV+SA+ YGATID+N L
Sbjct: 632 SSKPYDAVVKSAETYGATIDLNLL 655
>AT3G15200.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr3:5117489-5119060 REVERSE LENGTH=523 |
201606
Length = 523
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 62 NTNNVFKLLKEMYSAGLRPDRITHEKLVWVCTLEGHDSVAKELYSRIRERKSEISLSVCN 121
N + + K++ ++ RPD +++ ++ T +G A ELY + + + + +CN
Sbjct: 262 NVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICN 321
Query: 122 HVIWLLCKAKKWWTALRVYEDLLDKGPKPNNLPNELIISHFNILLTSARKREIWKWGDE 180
+VI LC K+ AL V+ ++ +KGP PN + ++ H L R ++W+ +E
Sbjct: 322 NVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKH---LCKIRRTEKVWELVEE 377
>AT5G59900.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr5:24123983-24126706 REVERSE LENGTH=907 | 201606
Length = 907
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 67 FKLLKEMYSAGLRPDRITHEKLVW-VCTLEGHDSVAKELYSRIRERKSEISLSVCNHVIW 125
+L +M S G+RPD + ++ +C L+ S AKE+ + + ++++ N +I
Sbjct: 212 MELFNDMVSVGIRPDVYIYTGVIRSLCELKDL-SRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 126 LLCKAKKWWTALRVYEDLLDKGPKPNNLPNELIISHFNILLTSARKREI---WKWGDE-- 180
LCK +K W A+ + +DL K KP+ ++++ ++ + +E + DE
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPD------VVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 181 --DFNQSSKAYDAVVESAKVYGATIDINSLERSDLDFLTSVNIWTFYA 226
F+ S A ++VE + G + +L + +DF S N++ + A
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
>AT2G26790.2 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr2:11425270-11427669 REVERSE LENGTH=799 | 201606
Length = 799
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 34 EFVKLEKFVICVCYQVMRCWLVKCDDHLNTNNVFKLLKEMYSAGLRPDRITHEKLVWVCT 93
EF + F+ VCY V L K F+LL+EM G+ PD I + L+
Sbjct: 378 EFRDMNIFLDRVCYNVAFDALSKLG---RVEEAFELLQEMKDRGIVPDVINYTTLIDGYC 434
Query: 94 LEGHDSVAKELYSRIRERKSEISLSVCNHVIWLLCKAKKWWTALRVYEDLLDKGPKPNNL 153
L+G A +L + L N ++ L + L +YE + +GPKPN +
Sbjct: 435 LQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAV 494
Query: 154 PNELII 159
N +II
Sbjct: 495 TNSVII 500