BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0540.1
(638 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 368 e-115
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 368 e-115
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 101 1e-24
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 90 6e-20
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 51 2e-07
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 368 bits (945), Expect = e-115, Method: Compositional matrix adjust.
Identities = 179/355 (50%), Positives = 239/355 (67%), Gaps = 6/355 (1%)
Query: 290 PDSGRPSRSRRPPSYLNDYVC-SNTNIVKYPLENYFSINSFSTSHQQFLSSVLSTTEPSS 348
P R R P+YL DY C S ++ + + + S S + FL + EPS+
Sbjct: 29 PSVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPST 88
Query: 349 FTQAMKSSHWRDAMAKEISVLEENQTWTITSLPPGKRPIGCKWVYKVKFKSDGSIERYKA 408
+ +A + W AM EI +E TW I +LPP K+PIGCKWVYK+K+ SDG+IERYKA
Sbjct: 89 YNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKA 148
Query: 409 RLVAKGYTQIKGIDYTDTFAPVAKLVTVRVLLSLAAIKGWKLHQLDVNNAFLQGDLNEEV 468
RLVAKGYTQ +GID+ +TF+PV KL +V+++L+++AI + LHQLD++NAFL GDL+EE+
Sbjct: 149 RLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEI 208
Query: 469 YMKLPPGFSS-QGES----KVCRLHKSLYGLKQASRQWFSKISSVLIERGFSQSKSDYSL 523
YMKLPPG+++ QG+S VC L KS+YGLKQASRQWF K S LI GF QS SD++
Sbjct: 209 YMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTY 268
Query: 524 FTFRSHSTQIYVLVYVDDIIITGNNDNAISQLKLFLNTAFSLKDLGRLQYFLGIEVSRSS 583
F + + + VLVYVDDIII NND A+ +LK L + F L+DLG L+YFLG+E++RS+
Sbjct: 269 FLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSA 328
Query: 584 QGIFLCQRKYALDILKDSGLTAARPSEFPMEQKLRLSPTDGTPLPDPSVYRRLIG 638
GI +CQRKYALD+L ++GL +PS PM+ + S G D YRRLIG
Sbjct: 329 AGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIG 383
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 368 bits (945), Expect = e-115, Method: Compositional matrix adjust.
Identities = 179/355 (50%), Positives = 239/355 (67%), Gaps = 6/355 (1%)
Query: 290 PDSGRPSRSRRPPSYLNDYVC-SNTNIVKYPLENYFSINSFSTSHQQFLSSVLSTTEPSS 348
P R R P+YL DY C S ++ + + + S S + FL + EPS+
Sbjct: 29 PSVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPST 88
Query: 349 FTQAMKSSHWRDAMAKEISVLEENQTWTITSLPPGKRPIGCKWVYKVKFKSDGSIERYKA 408
+ +A + W AM EI +E TW I +LPP K+PIGCKWVYK+K+ SDG+IERYKA
Sbjct: 89 YNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKA 148
Query: 409 RLVAKGYTQIKGIDYTDTFAPVAKLVTVRVLLSLAAIKGWKLHQLDVNNAFLQGDLNEEV 468
RLVAKGYTQ +GID+ +TF+PV KL +V+++L+++AI + LHQLD++NAFL GDL+EE+
Sbjct: 149 RLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEI 208
Query: 469 YMKLPPGFSS-QGES----KVCRLHKSLYGLKQASRQWFSKISSVLIERGFSQSKSDYSL 523
YMKLPPG+++ QG+S VC L KS+YGLKQASRQWF K S LI GF QS SD++
Sbjct: 209 YMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTY 268
Query: 524 FTFRSHSTQIYVLVYVDDIIITGNNDNAISQLKLFLNTAFSLKDLGRLQYFLGIEVSRSS 583
F + + + VLVYVDDIII NND A+ +LK L + F L+DLG L+YFLG+E++RS+
Sbjct: 269 FLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSA 328
Query: 584 QGIFLCQRKYALDILKDSGLTAARPSEFPMEQKLRLSPTDGTPLPDPSVYRRLIG 638
GI +CQRKYALD+L ++GL +PS PM+ + S G D YRRLIG
Sbjct: 329 AGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIG 383
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 101 bits (252), Expect = 1e-24, Method: Composition-based stats.
Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 338 SSVLSTT---EPSSFTQAMKSSHWRDAMAKEISVLEENQTWTITSLPPGKRPIGCKWVYK 394
S ++TT EP S A+K W AM +E+ L N+TW + P + +GCKWV+K
Sbjct: 17 SLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFK 76
Query: 395 VKFKSDGSIERYKARLVAKGYTQIKGIDYTDTFAPVAKLVTVRVLLSLA 443
K SDG+++R KARLVAKG+ Q +GI + +T++PV + T+R +L++A
Sbjct: 77 TKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 90.1 bits (222), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 533 IYVLVYVDDIIITGNNDNAISQLKLFLNTAFSLKDLGRLQYFLGIEVSRSSQGIFLCQRK 592
+Y+L+YVDDI++TG+++ ++ L L++ FS+KDLG + YFLGI++ G+FL Q K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 593 YALDILKDSGLTAARPSEFPMEQKLRLSPTDGTPLPDPSVYRRLIG 638
YA IL ++G+ +P P+ KL S PDPS +R ++G
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVG 105
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 34 HRHILEVARSLRLQAHLPLSCWGECVLTAVYLINKLPTPILLGKSPHEVLMGTPPNLSHL 93
+R I+E RS+ + LP + + TAV++INK P+ + P EV + P S+L
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 94 RVFGCLCFARIPLVKTKMDPRSSAG 118
R FGC+ + I + K+ PR+ G
Sbjct: 62 RRFGCVAY--IHCDEGKLKPRAKKG 84