BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0560.1
(677 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G67680.1 | SRP72 RNA-binding domain-containing protein | Chr1... 793 0.0
AT1G67650.1 | SRP72 RNA-binding domain-containing protein | Chr1... 755 0.0
AT4G31850.1 | proton gradient regulation 3 | Chr4:15403020-15406... 47 9e-05
>AT1G67680.1 | SRP72 RNA-binding domain-containing protein |
Chr1:25365962-25368464 REVERSE LENGTH=664 | 201606
Length = 664
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/660 (65%), Positives = 530/660 (80%), Gaps = 23/660 (3%)
Query: 1 MAPKTKEKPKTSQQSSSQPNNVSVEDLFSSLNRHIQRSEYEQAIKLADQVLMIVPGDEDA 60
MAPK+KEK KTS +SQP ++EDLF+SL++HI+ ++YE+A+K+ADQVL IVP DEDA
Sbjct: 1 MAPKSKEKSKTS---NSQPPP-AIEDLFTSLHQHIKDTKYEEAVKVADQVLSIVPTDEDA 56
Query: 61 LRCKIVALIKVDNID----------LALSTIQRSKNVNFDLGFYKAYCLYRQNKLDEALE 110
+RCK+VALIK D D ALS I + + DLGF+KAYCLYR NKLDEAL
Sbjct: 57 IRCKVVALIKDDKFDDYLIKDVKINGALSVINSFQKLPIDLGFHKAYCLYRVNKLDEALV 116
Query: 111 SLSSQEKTSVTMQLESQILYRLGKMEECMDVYQKLQKLKIESLEINIVAGLISAGRASEV 170
L E+ + T+ LE+QILYRLGK + C+DVYQKL K +IE+LE+N+VAGLISAG+AS+V
Sbjct: 117 CLKGLERDTDTLVLEAQILYRLGKADACVDVYQKLTKSQIETLEVNLVAGLISAGKASQV 176
Query: 171 QGTMDALKVKANSSFELAYNVACSLVEGNKYTEAEQQLLSARRIGQETLMDDNWA--DDE 228
Q T+++LK+K SSFELAYN ACSL+E N Y +AEQ LL+ARRIGQETL DD+ A D+E
Sbjct: 177 QKTLESLKIKPTSSFELAYNTACSLIENNNYADAEQLLLTARRIGQETLNDDDIALTDEE 236
Query: 229 IEIELAPIAVQLAYVRQLLGHPEEAIETYVDIINRNLPDDSSLAVAINNLIALKGSKDVS 288
IEIELAPIAVQLAYV+Q+LG +E+ +YVD I RNL D+ SLAVA+NNL+ALKG KD+S
Sbjct: 237 IEIELAPIAVQLAYVQQILGQTQESTSSYVDFIKRNLADEPSLAVAVNNLVALKGFKDIS 296
Query: 289 DGLRKLDKLIEKGATPNSFQLTRGLDLKLFSKQKEAIYSNRVLLLLYANRIDQARELVAA 348
DGLRK D L +K + +FQL++ LD KL K KEAIY+NRVLLLL+AN++DQAREL AA
Sbjct: 297 DGLRKFDLLKDKDS--QTFQLSQALDAKLSQKHKEAIYANRVLLLLHANKMDQARELCAA 354
Query: 349 LPSMFPSSVTPALLQAAVFVRENKANKAEEILLQFADRFPEKAKVALLARAQVAAAANHP 408
LP MFP S+ P LLQAAV VRENKA KAEE+L Q A++FPEK+K+ LLARAQ+AA+A+HP
Sbjct: 355 LPGMFPESIIPTLLQAAVLVRENKAAKAEELLGQCAEKFPEKSKLVLLARAQIAASASHP 414
Query: 409 QIAAESLSKIVDIQHMPATVATLVSLKERSGDIDGASKVFDSAISWWSNAMSEDNKLDQI 468
+AAESLSKI DIQH+PATVAT+V+LKER+GD DGA+ V DSAI WWSN+M+E +KL +
Sbjct: 415 HVAAESLSKIPDIQHLPATVATIVALKERAGDNDGAAAVLDSAIKWWSNSMTESSKLRVL 474
Query: 469 MHEAASFKLKHGREEEAARLYEDLVKSHGSVEALVGLVTTATRVDVNKAEAYEKQLKPLP 528
M EAA+FKL+HG+EEEA+RLYE++VK+H S +ALVGLVTT RV+V KAE+YEKQLKPLP
Sbjct: 475 MPEAAAFKLRHGQEEEASRLYEEIVKNHNSTDALVGLVTTLARVNVEKAESYEKQLKPLP 534
Query: 529 GLKSVDVDTLEKTSGAKHDENGDNLRNIDVYEEAKAKAKSKKKRKRKPKYPKGFDPANPG 588
GLK+VDVD LEKT GAK E + +E K K+K+KRKRKPKYPKGFDPANPG
Sbjct: 535 GLKAVDVDKLEKTYGAKPIEGAAASSS----QEEVKKEKAKRKRKRKPKYPKGFDPANPG 590
Query: 589 PPPDPERWLPRRERSSYRPKRKDKRAAQVRGSQGAVVKEKQETGNASSSSNTNTSKSKTN 648
PPPDPERWLPRRERSSY+PKRKDKRAAQ+RGSQGAV K+KQE ++S SN + SK N
Sbjct: 591 PPPDPERWLPRRERSSYKPKRKDKRAAQIRGSQGAVTKDKQEAAPSTSKSN-QVASSKGN 649
>AT1G67650.1 | SRP72 RNA-binding domain-containing protein |
Chr1:25359832-25362395 REVERSE LENGTH=651 | 201606
Length = 651
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/660 (60%), Positives = 505/660 (76%), Gaps = 33/660 (5%)
Query: 1 MAPKTKEKPKTSQQSSSQPNNVSVEDLFSSLNRHIQRSEYEQAIKLADQVLMIVPGDEDA 60
MAPK+KE PKTS + +EDLF+SL++HI+ ++YE+A+K+ADQVL IVP DEDA
Sbjct: 1 MAPKSKENPKTSTPA--------IEDLFTSLHKHIKDTKYEEAVKVADQVLSIVPTDEDA 52
Query: 61 LRCKIVALIKVDNID----------LALSTIQRSKNVNFDLGFYKAYCLYRQNKLDEALE 110
+RCK+VALIK D D ALS I + DLGF+KAYCLYR+NKLDEAL
Sbjct: 53 IRCKVVALIKDDKFDDYLIKDVKINGALSVIN---SFPIDLGFHKAYCLYRENKLDEALV 109
Query: 111 SLSSQEKTSVTMQLESQILYRLGKMEECMDVYQKLQKLKIESLEINIVAGLISAGRASEV 170
L E+ S T+ LE+QIL LGK++ C+DVYQKL K I+ +E+N+VA LI AG+AS+V
Sbjct: 110 CLKGLERESKTLLLEAQILNCLGKVDACVDVYQKLNKSGIKLIEVNLVAALIRAGKASQV 169
Query: 171 QGTMDALKVKANSSFELAYNVACSLVEGNKYTEAEQQLLSARRIGQETLMDDNWADDEIE 230
+++LK++ ++++LAYN ACSL+E + Y +AEQ LL+A RIGQETL + +++DD IE
Sbjct: 170 ---LESLKIRPTTTYQLAYNTACSLIENSNYVDAEQLLLTAMRIGQETLTEGDYSDDYIE 226
Query: 231 IELAPIAVQLAYVRQLLGHPEEAIETYVDIINRNLPDDSSLAVAINNLIALKGSKDVSDG 290
+LAPI+VQLAYV+Q+LG +E+ +YVDII RNL D+S LA+A+NNL+ALKGSKD+SDG
Sbjct: 227 TQLAPISVQLAYVQQVLGQTQESKSSYVDIIKRNLADES-LALAVNNLVALKGSKDISDG 285
Query: 291 LRKLDKLIEKGATPNSFQLTRGLDLKLFSKQKEAIYSNRVLLLLYANRIDQARELVAALP 350
LRK D L +K + +FQL++ LD KL K KEAIY+NRVLLLL+AN++DQAREL A LP
Sbjct: 286 LRKFDLLKDKDS--QNFQLSQELDAKLSHKHKEAIYANRVLLLLHANKMDQARELCATLP 343
Query: 351 SMFPSSVTPALLQAAVFVRENKANKAEEILLQFADRFPEKAKVALLARAQVAAAANHPQI 410
MFP SV P LLQAAV VRENKA KAEE+L Q A+ FPEK+K+ LLARAQ+AA+A+HP +
Sbjct: 344 GMFPESVIPTLLQAAVLVRENKAAKAEELLGQCAENFPEKSKLVLLARAQIAASASHPHV 403
Query: 411 AAESLSKIVDIQHMPATVATLVSLKERSGDIDGASKVFDSAISWWSNAMSEDNKLDQIMH 470
AAESLSKI DIQH+PATVAT+V+L+ER+GD DGA+ V DSAI WWS++M++ N L +M
Sbjct: 404 AAESLSKIPDIQHLPATVATIVALRERAGDNDGATAVLDSAIRWWSDSMTDSNMLRILMP 463
Query: 471 EAASFKLKHGREEEAARLYEDLVKSHGSVEALVGLVTTATRVDVNKAEAYEKQLKPLPGL 530
AA+FKL+HG+EEEA+RLYE++VK+H S +ALVGLVTT RV+V KAEAYEKQLKPLPGL
Sbjct: 464 VAAAFKLRHGQEEEASRLYEEIVKNHNSTDALVGLVTTLARVNVEKAEAYEKQLKPLPGL 523
Query: 531 KSVDVDTLEKTSGAKHDENGDNLRNIDVYEEAKAKAKSKKKRKRKPKYPKGFDPANPGPP 590
K+VDVD LEKTSGAK E G + ++ E K K K K+K K KGFD N GP
Sbjct: 524 KAVDVDNLEKTSGAKPIE-GISAASLSQEEVKKEKVKRKRKPKYP----KGFDLENSGPT 578
Query: 591 PDPERWLPRRERSSYRPKRKDKRAAQVRGSQGAVVKEKQETGNASSSSNTNTSKSKTNQA 650
PDPERWLPRRERSSYRPKRKDKRAAQ+RGSQGA+ K KQE S+S + + SK N A
Sbjct: 579 PDPERWLPRRERSSYRPKRKDKRAAQIRGSQGALTKVKQEEA-PSTSKSKQAAISKANAA 637
>AT4G31850.1 | proton gradient regulation 3 | Chr4:15403020-15406358
FORWARD LENGTH=1112 | 201606
Length = 1112
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 106/500 (21%), Positives = 193/500 (38%), Gaps = 90/500 (18%)
Query: 2 APKTKEKPKTSQQSSSQPNNVSVEDLFSSLNRHIQR-----SEYEQAIKLADQVLMIVPG 56
A + EK KT + + +++ D FS NR + SE E+ + D V +
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSD-NRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 57 DEDALRCKIVALIKVDNIDLALST--IQRSKNVNFDLGFYKAY-C-LYRQNKLDEALESL 112
D AL K N A T + R + + +L Y C L R ++LD+ALE
Sbjct: 371 D---------ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 113 SSQEKTSVTMQLESQILY--RLGKMEECMDVYQKLQKLKIESLEINIVA------GLISA 164
+ E V + I++ GK + + + +K+K + + NIVA L A
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481
Query: 165 GRASEVQGTMDALKVKANSSFELAYNVACSLVEGNKYTEAEQQLLSARR--------IGQ 216
GR E + LK + YN+ + +LLS I
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 217 ETLMDDNWADDEI-----------EIELAPIAVQLAYVRQLL---GHPEEAIETYVDIIN 262
+L++ + D + E++L P V + L G +EAIE + ++
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 263 RNLPDDSSLAVAINNLI-ALKGSKDVSDGLRKLDKLIEKGATPNSF---QLTRGL----- 313
+ P ++ + N L L + +V+ L+ L K+++ G P+ F + GL
Sbjct: 602 KGCPPNT---ITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658
Query: 314 ---DLKLFSKQKEAIYSNRVLLLLYANRIDQARELVAALPSMFPSSVTPALLQAAVFVRE 370
+ F + K+ +Y + V L ++ P V +L++ A +
Sbjct: 659 VKEAMCFFHQMKKLVYPDFV-----------------TLCTLLPGVVKASLIEDAYKIIT 701
Query: 371 NKANKAEEILLQFADRFPEKAKVALLARAQVAAAANHPQ-IAAESLSKIVDIQHMPATVA 429
N + Q A+ F E ++LA A + A + + + A + + D +P
Sbjct: 702 NFLYNCAD---QPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP---- 754
Query: 430 TLVSLKERSGDIDGASKVFD 449
++ + ++ GA +F+
Sbjct: 755 -IIRYSCKHNNVSGARTLFE 773