BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0600.1
(268 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 129 1e-33
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 129 1e-33
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 97 1e-24
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 129 bits (325), Expect = 1e-33, Method: Composition-based stats.
Identities = 66/131 (50%), Positives = 88/131 (67%), Gaps = 8/131 (6%)
Query: 111 EPVTFKQAITAEESESWLVAMQEEMESLHKNKTWEVVPLPKGKSVIGCKWVYKKKEDSSE 170
EP T+ +A +E W AM +E+ ++ TWE+ LP K IGCKWVYK K +S
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD- 140
Query: 171 IKGT--RYKARLVAKGYAQKEGVDYNEIFSPVVKHTSIRVLLSIVAHSDLELEQLDVKTA 228
GT RYKARLVAKGY Q+EG+D+ E FSPV K TS++++L+I A + L QLD+ A
Sbjct: 141 --GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNA 198
Query: 229 FLHGDLEKEIY 239
FL+GDL++EIY
Sbjct: 199 FLNGDLDEEIY 209
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 129 bits (325), Expect = 1e-33, Method: Composition-based stats.
Identities = 66/131 (50%), Positives = 88/131 (67%), Gaps = 8/131 (6%)
Query: 111 EPVTFKQAITAEESESWLVAMQEEMESLHKNKTWEVVPLPKGKSVIGCKWVYKKKEDSSE 170
EP T+ +A +E W AM +E+ ++ TWE+ LP K IGCKWVYK K +S
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD- 140
Query: 171 IKGT--RYKARLVAKGYAQKEGVDYNEIFSPVVKHTSIRVLLSIVAHSDLELEQLDVKTA 228
GT RYKARLVAKGY Q+EG+D+ E FSPV K TS++++L+I A + L QLD+ A
Sbjct: 141 --GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNA 198
Query: 229 FLHGDLEKEIY 239
FL+GDL++EIY
Sbjct: 199 FLNGDLDEEIY 209
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 97.1 bits (240), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 87/155 (56%), Gaps = 10/155 (6%)
Query: 102 EYALSVEDDEPVTFKQAITAEESESWLVAMQEEMESLHKNKTWEVVPLPKGKSVIGCKWV 161
+Y+L++ K I A + W AMQEE+++L +NKTW +VP P ++++GCKWV
Sbjct: 15 KYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWV 74
Query: 162 YKKKEDSSEIKGT--RYKARLVAKGYAQKEGVDYNEIFSPVVKHTSIRVLLSIVAHSDLE 219
+K K S GT R KARLVAKG+ Q+EG+ + E +SPVV+ +IR +L++ LE
Sbjct: 75 FKTKLHSD---GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA--QQLE 129
Query: 220 LEQ---LDVKTAFLHGDLEKEIYTSRSFAKVTLFI 251
+ Q K F G +K+ LFI
Sbjct: 130 VGQSINWMFKMHFSMGIFKKKFICINLLVLRILFI 164