BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0610.1
(223 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 119 2e-30
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 119 2e-30
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 80 4e-18
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 54 2e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 119 bits (297), Expect = 2e-30, Method: Composition-based stats.
Identities = 68/182 (37%), Positives = 102/182 (56%), Gaps = 3/182 (1%)
Query: 1 MDRVPYASAVGSLTYVMVCTRPDISQAVSVASRFKANPGKTHWEAVKWVLRYLKGTVDTG 60
+D Y +G L Y+ + TR DIS AV+ S+F P H +AV +L Y+KGTV G
Sbjct: 373 VDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 431
Query: 61 LCFCGDT-CQVSGYVDSNYAGYLDRRRSTTGYVFRVHGAPVSWRSMLQSTVALSTTEAEY 119
L + Q+ + D+++ D RRST GY + + +SW+S Q V+ S+ EAEY
Sbjct: 432 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 491
Query: 120 MAMAEGVKEALWLWGLLDDLRIK-QKCVDVWCDSQSAIHLAKNQVHHARTKHIDVRYHFV 178
A++ E +WL +L++ K ++CD+ +AIH+A N V H RTKHI+ H V
Sbjct: 492 RALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSV 551
Query: 179 RD 180
R+
Sbjct: 552 RE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 119 bits (297), Expect = 2e-30, Method: Composition-based stats.
Identities = 68/182 (37%), Positives = 102/182 (56%), Gaps = 3/182 (1%)
Query: 1 MDRVPYASAVGSLTYVMVCTRPDISQAVSVASRFKANPGKTHWEAVKWVLRYLKGTVDTG 60
+D Y +G L Y+ + TR DIS AV+ S+F P H +AV +L Y+KGTV G
Sbjct: 373 VDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 431
Query: 61 LCFCGDT-CQVSGYVDSNYAGYLDRRRSTTGYVFRVHGAPVSWRSMLQSTVALSTTEAEY 119
L + Q+ + D+++ D RRST GY + + +SW+S Q V+ S+ EAEY
Sbjct: 432 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 491
Query: 120 MAMAEGVKEALWLWGLLDDLRIK-QKCVDVWCDSQSAIHLAKNQVHHARTKHIDVRYHFV 178
A++ E +WL +L++ K ++CD+ +AIH+A N V H RTKHI+ H V
Sbjct: 492 RALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSV 551
Query: 179 RD 180
R+
Sbjct: 552 RE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 80.5 bits (197), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 2/131 (1%)
Query: 2 DRVPYASAVGSLTYVMVCTRPDISQAVSVASRFKANPGKTHWEAVKWVLRYLKGTVDTGL 61
D + S VG+L Y+ + TRPDIS AV++ + P ++ +K VLRY+KGT+ GL
Sbjct: 96 DPSDFRSIVGALQYLTL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGL 154
Query: 62 CFCGDT-CQVSGYVDSNYAGYLDRRRSTTGYVFRVHGAPVSWRSMLQSTVALSTTEAEYM 120
++ V + DS++AG RRSTTG+ + +SW + Q TV+ S+TE EY
Sbjct: 155 YIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYR 214
Query: 121 AMAEGVKEALW 131
A+A E W
Sbjct: 215 ALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 53.9 bits (128), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 17 MVCTRPDISQAVSVASRFKANPGKTHWEAVKWVLRYLKGTVDTGLCFCGDT-CQVSGYVD 75
+ TRPD++ AV+ S+F + +AV VL Y+KGTV GL + + Q+ + D
Sbjct: 3 LTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFAD 62
Query: 76 SNYAGYLDRRRSTTGY 91
S++A D RRS TG+
Sbjct: 63 SDWASCPDTRRSVTGF 78