BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0660.1
(1728 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00750.1 | GAG/POL/ENV polyprotein | ChrM:220830-221189 FORWA... 78 1e-16
ATMG00860.1 | DNA/RNA polymerases superfamily protein | ChrM:235... 78 5e-16
>ATMG00750.1 | GAG/POL/ENV polyprotein | ChrM:220830-221189 FORWARD
LENGTH=119 | 201606
Length = 119
Score = 78.2 bits (191), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 1383 ILQCGFYWPSIFKDTHAYCLACERCQKLGSISRRNMMPLNPILVVEVFDVWGIDFM 1438
+LQ GFYWP+ FKD H + +C+ CQ+ G+ ++RN MP + IL VEVFDVWGI FM
Sbjct: 35 VLQAGFYWPTTFKDAHGFVSSCDACQRKGNFTKRNEMPQHFILEVEVFDVWGIYFM 90
>ATMG00860.1 | DNA/RNA polymerases superfamily protein |
ChrM:235916-236392 FORWARD LENGTH=158 | 201606
Length = 158
Score = 77.8 bits (190), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 1094 HVISEKGIEVDKVKVELIKSLPVPKTVKDIRSFLGHAGFYRRFIKDFSKISRPLCNLLAK 1153
H+IS +G+ D K+E + P PK ++R FLG G+YRRF+K++ KI RPL LL K
Sbjct: 37 HIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELL-K 95
Query: 1154 ENKFVFDGPCLEAFEKLKLMLTSTPIVQPPNWSTPF 1189
+N + AF+ LK +T+ P++ P+ PF
Sbjct: 96 KNSLKWTEMAALAFKALKGAVTTLPVLALPDLKLPF 131